Factsheet for Solyc01g010350.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g00600.t01	Wine grape	plastid	74.39	73.67
Solyc10g008980.2.1	Tomato	plastid	66.59	65.78
VIT_01s0011g00590.t01	Wine grape	plastid	62.93	62.62
Solyc03g031740.1.1	Tomato	plastid	34.39	37.01
Solyc07g064270.2.1	Tomato	plastid	33.66	34.94
Solyc05g045670.2.1	Tomato	plastid	32.93	33.67
Solyc02g086650.2.1	Tomato	plastid	31.71	32.75
Solyc03g112870.2.1	Tomato	plastid	32.44	32.44
Solyc01g081390.2.1	Tomato	plastid	31.95	31.04
Solyc07g052450.1.1	Tomato	plastid	12.93	26.37

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	UniProt:K4ATN0
PFAM:PF03151	PANTHER:PTHR44585	PANTHER:PTHR44585:SF3	SUPFAM:SSF103481	EnsemblPlantsGene:Solyc01g010350.2	EnsemblPlants:Solyc01g010350.2.1
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0002761AF2	SEG:seg

Description

No Description!

Coordinates

chr1:-:5153980..5158097

Molecular Weight (calculated)

45408.6 Da

IEP (calculated)

10.011

GRAVY (calculated)

0.433

Length

410 amino acids

Sequence
(BLAST)

001: MASISNSFHF SLKRSNFYSS SSHKLINRNL TNSVSLKNLS IIANSKNFES IKPKCSQLLK PRNSVDVFVT KAVAADAEGH DIEITDGYVK PTKGFAEKFP
101: ALVTGFFFFT WYFLNVIFNI LNKKVYNYFP YPYFVSVVHL LVGVTYCLIS WTVGLPKRAP INKELLALLT PVAFCHALGH VMSNVSFATV AVSFTHTIKA
201: LEPFFSASAS QFVLGHQIPV SLWLSLAPVV IGVSMASLTE LSFNWTGFIS AMISNIAFTY RSIYSKKAMT GMDSTNVYAY ISIIALLFCL PPAIFIEGPQ
301: LLQYGFRDAI AKVGLYKFLS DLLWIGMFYH LYNQIATNTL ERVAPLTHAV GNVLKRVFVI GFSIVVFGNK ISTQTGIGTA IAIAGVAIYS LIKARMEEQK
401: RKASALAHEQ

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.