Factsheet for VIT_01s0011g00600.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g010350.2.1	Tomato	plastid	73.67	74.39
VIT_01s0011g00590.t01	Wine grape	plastid	67.63	67.96
VIT_10s0003g00300.t01	Wine grape	plastid	65.94	67.24
VIT_19s0177g00300.t01	Wine grape	plastid	34.06	36.25
VIT_10s0116g00760.t01	Wine grape	plastid	32.37	34.1
VIT_15s0024g01440.t01	Wine grape	plastid	32.61	31.62
VIT_17s0000g08560.t01	Wine grape	plastid	28.99	29.27
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	29.95	28.77

Protein Annotations

EntrezGene:100259322	wikigene:100259322	MapMan:24.2.1.1.1	MapMan:3.1.1.1	ProteinID:CBI27279	ProteinID:CBI27279.3
UniProt:D7T9V7	EMBL:FN595752	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100259322
wikigene:LOC100259322	PFAM:PF03151	PANTHER:PTHR44585	PANTHER:PTHR44585:SF3	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom
TIGR:TC61733	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0001982882	ArrayExpress:VIT_01s0011g00600
EnsemblPlantsGene:VIT_01s0011g00600	EnsemblPlants:VIT_01s0011g00600.t01	unigene:Vvi.1094	RefSeq:XP_002267940	RefSeq:XP_002267940.1	RefSeq:XP_010649603.1
RefSeq:XP_019076270.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1:-:550208..556153

Molecular Weight (calculated)

44998.5 Da

IEP (calculated)

10.240

GRAVY (calculated)

0.550

Length

414 amino acids

Sequence
(BLAST)

001: MASLAASVRC SQFSSLGLNA KRISRNYGLP RTPSLVSASP FSALPEIRVS AAPVQFSGNA LKFAGWDPLL RRQGGAGVKL PVPAAAAADA DGVTKPSKSF
101: AEKFPVLVTG FFFFMWYFLN VIFNILNKKV YNYFPYPYFV SLIHLLVGVA YCLVSWAVGL PKRAPMDKEL LLLLTPVALC HALGHVMSNV SFAAVAVSFT
201: HTIKALEPFF NAAASQFVLG HQIPFSLWLS LAPVVIGVSM ASLTELSFNW TGFISAMISN IAFTYRSIYS KKAMTGMDST NVYAYTSIIA LLFCIPPAVL
301: IEGPQLMQYG FRDAIAKVGL TKFLSDLFWI GMFYHLYNQL ATNTLERVAP LTHAVGNVLK RVFVIGFSIV IFGNKISRQT GIGTAIAIAG VAIYSLIKAN
401: IEEQKRKAAV TPAS

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.