Factsheet for VIT_10s0003g00300.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046001_P001	Maize	plastid	31.53	88.28
KRH50117	Soybean	mitochondrion, plastid	84.24	84.24
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	69.95	83.78
KRH20388	Soybean	plastid	83.74	83.74
GSMUA_Achr3P03200_001	Banana	plastid	83.25	82.64
Bra025037.1-P	Field mustard	mitochondrion, plastid	81.03	80.84
CDY33455	Canola	plastid	80.54	80.34
CDY48790	Canola	mitochondrion	79.56	80.15
CDX77632	Canola	plastid	80.3	79.13
AT5G46110.4	Thale cress	mitochondrion	80.3	78.55
GSMUA_Achr10P...	Banana	plastid	79.06	78.29
PGSC0003DMT400058772	Potato	plastid	79.8	78.07
Solyc10g008980.2.1	Tomato	plastid	79.31	77.59
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	75.12	75.87
TraesCS3D01G168600.1	Wheat	mitochondrion	74.88	75.62
EER99986	Sorghum	plastid	75.37	75.37
Os01t0239200-01	Rice	plastid	76.85	74.82
Zm00001d039258_P001	Maize	plastid	75.37	74.82
Zm00001d009028_P001	Maize	plastid	73.89	74.07
TraesCS3A01G161300.1	Wheat	golgi	74.63	73.37
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	30.79	73.1
Os05t0241200-01	Rice	plastid	70.2	70.54
HORVU1Hr1G016360.1	Barley	plastid	69.95	69.95
OQU77692	Sorghum	plastid	71.18	69.47
TraesCS1D01G078000.1	Wheat	plastid	69.46	69.46
TraesCS1A01G075700.2	Wheat	plastid	69.21	69.38
TraesCS1B01G094300.1	Wheat	plastid	68.47	68.47
VIT_01s0011g00600.t01	Wine grape	plastid	67.24	65.94
CDY53419	Canola	mitochondrion	79.56	62.84
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	33.0	62.04
VIT_01s0011g00590.t01	Wine grape	plastid	59.61	58.74
CDY04362	Canola	plastid	32.51	55.23
Bra022019.1-P	Field mustard	mitochondrion	79.31	50.23
VIT_19s0177g00300.t01	Wine grape	plastid	32.27	33.68
VIT_15s0024g01440.t01	Wine grape	plastid	35.22	33.49
VIT_10s0116g00760.t01	Wine grape	plastid	32.02	33.08
VIT_17s0000g08560.t01	Wine grape	plastid	31.28	30.98
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	30.3	28.54

Protein Annotations

EntrezGene:100257292	wikigene:100257292	MapMan:24.2.1.1.1	MapMan:3.1.1.1	EMBL:AM450850	ProteinID:CAN65381
ProteinID:CAN65381.1	ProteinID:CBI30612	ProteinID:CBI30612.3	UniProt:D7TJE0	EMBL:FN595992	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100257292	wikigene:LOC100257292	PFAM:PF03151	PANTHER:PTHR44585
PANTHER:PTHR44585:SF2	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGR:TC55453	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	UniParc:UPI00015CCC04	ArrayExpress:VIT_10s0003g00300	EnsemblPlantsGene:VIT_10s0003g00300	EnsemblPlants:VIT_10s0003g00300.t01	unigene:Vvi.4316
RefSeq:XP_002278829	RefSeq:XP_002278829.1	:	:	:	:

Description

No Description!

Coordinates

chr10:-:1588718..1593155

Molecular Weight (calculated)

44311.8 Da

IEP (calculated)

9.865

GRAVY (calculated)

0.541

Length

406 amino acids

Sequence
(BLAST)

001: MESRVLSGAT TISGLVRLRK PVRDTVCFAP ARPIGAVGDG GNLIWGRQLR PALILESAPV VGMTTGKREI LRPTMASTSS PAEGSDSAGD AKIGFLDKYP
101: ALVTGFFFFM WYFLNVIFNI LNKKIYNYFP YPYFVSVIHL FVGVVYCLVS WGVGLPKRAP IDSNLLKLLI PVAVCHALGH VTSNVSFAAV AVSFTHTIKA
201: LEPFFNAAAS QFILGQSIPL TLWLSLAPVV LGVSMASLTE LSFNWIGFIS AMISNISFTY RSIYSKKAMT DMDSTNIYAY ISIIALIVCI PPALIVEGPQ
301: LMKHGFNDAI AKVGLTKFLS DLFWVGMFYH LYNQLATNTL ERVAPLTHAV GNVLKRVFVI GFSILVFGNK ISTQTGIGTC VAIAGVAMYS FIKAKMEEEK
401: RQLKSA

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.