Factsheet for VIT_14s0066g01000.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0080g00970.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01550.1	VIT_06s0080g00970.t01	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0170950-00	Rice	endoplasmic reticulum	15.08	71.43
PGSC0003DMT400001273	Potato	plastid	59.16	64.23
Solyc02g086650.2.1	Tomato	plastid	58.93	63.98
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	16.24	63.64
KRG93252	Soybean	plastid	60.09	63.48
AT3G01550.1	Thale cress	mitochondrion, plastid	54.76	61.62
VIT_17s0000g08560.t01	Wine grape	plastid	58.47	61.46
CDX74305	Canola	plastid	53.83	60.73
Bra001003.1-P	Field mustard	plastid	53.6	60.63
CDX91942	Canola	plastid	53.13	59.79
EES17796	Sorghum	plastid	48.49	52.12
TraesCS1D01G116600.1	Wheat	plastid	48.72	51.98
Os01t0172100-01	Rice	plastid	47.33	51.91
HORVU1Hr1G025390.3	Barley	plastid	48.96	51.84
TraesCS1A01G115200.1	Wheat	plastid	48.96	51.84
TraesCS1B01G135100.1	Wheat	plastid	49.19	51.71
Zm00001d039674_P001	Maize	plastid	49.19	51.08
KXG31751	Sorghum	plastid	48.96	50.24
TraesCS3A01G130300.1	Wheat	plastid	45.71	49.62
TraesCS3D01G131200.1	Wheat	plastid	45.71	49.5
TraesCS3B01G149400.1	Wheat	plastid	45.71	49.37
Zm00001d037659_P001	Maize	plastid	48.03	48.48
HORVU3Hr1G024590.1	Barley	peroxisome	41.07	43.28
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	19.72	38.12
Zm00001d034088_P001	Maize	extracellular	24.13	37.01
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	22.74	35.77
VIT_19s0177g00300.t01	Wine grape	plastid	28.54	31.62
VIT_01s0011g00590.t01	Wine grape	plastid	30.16	31.55
VIT_10s0116g00760.t01	Wine grape	plastid	28.54	31.3
VIT_10s0003g00300.t01	Wine grape	plastid	28.54	30.3
VIT_15s0024g01440.t01	Wine grape	plastid	29.93	30.21
VIT_01s0011g00600.t01	Wine grape	plastid	28.77	29.95

Protein Annotations

EntrezGene:100266464	wikigene:100266464	MapMan:24.2.1.1.1	ProteinID:CCB58500	ProteinID:CCB58500.1	UniProt:F6HUY2
EMBL:FN596252	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0015120	GO:GO:0015121	GO:GO:0015713	GO:GO:0015714	GO:GO:0016020
GO:GO:0016021	GO:GO:0016429	GO:GO:0016740	GO:GO:0022857	GO:GO:0030488	GO:GO:0031515
GO:GO:0055085	GO:GO:0089722	EntrezGene:LOC100266464	wikigene:LOC100266464	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF6	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI00021093E3	ArrayExpress:VIT_14s0066g01000	EnsemblPlantsGene:VIT_14s0066g01000	EnsemblPlants:VIT_14s0066g01000.t01	unigene:Vvi.21826	RefSeq:XP_002276496
RefSeq:XP_002276496.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:+:27436860..27442874

Molecular Weight (calculated)

47328.6 Da

IEP (calculated)

10.656

GRAVY (calculated)

0.423

Length

431 amino acids

Sequence
(BLAST)

001: MGKMGKWIRA SGPIPKYDVF MGVIHIIAQR MHITALALSP SAPFLKPKNL LNRNPNPSPG VVPVQLHLLT STNGLSCHRS SSLFSSLSSV LFPYPNPRFS
101: GFKFRASSVP ENAEETEKSS NLGGILQLGS MFAIWYLLNI YFNIFNKQIL KVYPFPATVT AFQFGCGTVL VILMWAFNLY KRPKISKSQF SGILILAVTH
201: TMGNLLTNLS LRKVAVSFTH TIKAMEPFFT VVLATLFLGE KPTLPIVSSL VPIVGGVALA SFTESSFNWT GFWSAMASNL TNQSRNVFSK KFMVNKEEAL
301: DTINLFSVIT VISFLLCTPV AIFIEGIKFT PSYLQFAASQ GLNVRELCVR SLLAGICFHS YQQVSYTILQ MVSPVTHAVG NCVKRVVVII SSVIFFQTPA
401: SPINSLGTGV ALVGVFLYSR AKRMKPKPKA A

Best Arabidopsis Sequence Match ( AT3G01550.1 )
(BLAST)

001: MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP ENVEGGDLES GSLVKGLKLG GMFGVWYLLN IYYNIFNKQV
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS

Arabidopsis Description

PPT2Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.