Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G01550.1 | CDX70995 | AT5G22290.1 | 21798944 |
AT3G01550.1 | CDX88803 | AT5G22290.1 | 21798944 |
AT3G01550.1 | CDX92368 | AT5G22290.1 | 21798944 |
AT3G01550.1 | CDY09128 | AT5G22290.1 | 21798944 |
AT3G01550.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra001003.1-P | Field mustard | plastid | 99.74 | 100.0 |
CDX91942 | Canola | plastid | 97.12 | 96.87 |
AT3G01550.1 | Thale cress | mitochondrion, plastid | 86.13 | 85.9 |
Os05t0170950-00 | Rice | endoplasmic reticulum | 14.66 | 61.54 |
PGSC0003DMT400001273 | Potato | plastid | 61.78 | 59.45 |
Solyc02g086650.2.1 | Tomato | plastid | 61.52 | 59.19 |
Zm00001d017901_P001 | Maize | cytosol, plasma membrane, plastid | 15.97 | 55.45 |
KRG93252 | Soybean | plastid | 59.16 | 55.39 |
VIT_14s0066g01000.t01 | Wine grape | mitochondrion, plastid | 60.73 | 53.83 |
CDY12390 | Canola | plastid | 53.14 | 50.5 |
CDY47555 | Canola | plastid | 53.66 | 50.37 |
Os01t0172100-01 | Rice | plastid | 49.74 | 48.35 |
TraesCS1A01G115200.1 | Wheat | plastid | 51.31 | 48.16 |
HORVU1Hr1G025390.3 | Barley | plastid | 51.31 | 48.16 |
TraesCS1D01G116600.1 | Wheat | plastid | 50.79 | 48.02 |
TraesCS1B01G135100.1 | Wheat | plastid | 51.05 | 47.56 |
EES17796 | Sorghum | plastid | 49.74 | 47.38 |
TraesCS3D01G131200.1 | Wheat | plastid | 48.95 | 46.98 |
TraesCS3A01G130300.1 | Wheat | plastid | 48.69 | 46.85 |
TraesCS3B01G149400.1 | Wheat | plastid | 48.69 | 46.62 |
Zm00001d039674_P001 | Maize | plastid | 50.0 | 46.02 |
KXG31751 | Sorghum | plastid | 49.48 | 45.0 |
Zm00001d037659_P001 | Maize | plastid | 48.69 | 43.56 |
HORVU3Hr1G024590.1 | Barley | peroxisome | 45.03 | 42.05 |
Zm00001d034088_P001 | Maize | extracellular | 25.39 | 34.52 |
CDY16905 | Canola | plastid | 35.86 | 34.16 |
Zm00001d051000_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 19.9 | 34.08 |
CDY38448 | Canola | plastid | 35.86 | 34.08 |
Zm00001d044715_P001 | Maize | cytosol, plasma membrane, plastid | 24.35 | 33.94 |
CDY34641 | Canola | plastid | 30.89 | 32.51 |
CDY55220 | Canola | plastid | 31.94 | 31.52 |
CDY25324 | Canola | plastid | 32.2 | 31.14 |
CDY52572 | Canola | plastid | 31.68 | 31.03 |
CDY43022 | Canola | plastid | 31.41 | 30.77 |
CDY48790 | Canola | mitochondrion | 32.46 | 30.77 |
CDX77632 | Canola | plastid | 32.98 | 30.58 |
CDY33455 | Canola | plastid | 32.46 | 30.47 |
CDY04362 | Canola | plastid | 18.85 | 30.13 |
CDY17274 | Canola | plastid | 31.41 | 28.99 |
CDY19859 | Canola | plastid | 31.41 | 28.99 |
CDY06630 | Canola | plastid | 31.94 | 26.99 |
CDY28750 | Canola | plastid | 31.41 | 26.67 |
CDY53419 | Canola | mitochondrion | 32.72 | 24.32 |
Protein Annotations
MapMan:24.2.1.1.1 | GO:A0A078CBW9 | EnsemblPlants:CDX74305 | ProteinID:CDX74305 | ProteinID:CDX74305.1 | GO:GO:0003674 |
GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00112098001 | PFAM:PF03151 | PANTHER:PTHR43973 | PANTHER:PTHR43973:SF6 |
SUPFAM:SSF103481 | InterPro:Sugar_P_trans_dom | TIGRFAMs:TIGR00817 | TMHMM:TMhelix | InterPro:Tpt_PEP_transl | UniParc:UPI0004EE9D62 |
SEG:seg | : | : | : | : | : |
Description
BnaA03g27420D
Coordinates
chrLK031800:-:2133785..2136070
Molecular Weight (calculated)
41808.8 Da
IEP (calculated)
10.507
GRAVY (calculated)
0.454
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLITPYPRL VSPLLATKST PESSFTRRAR ASSSSSSSSS SYHWPFLTPK RRLNGFKLKS ATVPGDVESG SLVKGLKLGG MFGVWYLLNI YYNIFNKQVL
101: RVFPYPATVT AFQLGCGTLM ISIMWLLKLH PRPKVTPSQL PAILQLAAAH TLGNLLTNVS LGRVNVSFTH TIKAMEPFFT VLFSVLLLGE WPSLWIVCSL
201: LPIVAGVSLA SFTEASFNWI GFCSAMASNV TNQSRNVLSK KFMVEKEALD NINLFSIITI ISFVLLVPVA ILIDGFKFTP SHLQLATSQG LTVKEFCLMS
301: LLAGVCLHSY QQVSYMILEM VSPVTHSVGN CVKRVVVIAS SILFFKTPVS PLNSIGTATA LAGVYLYTRA KRIKPNPNSK SS
101: RVFPYPATVT AFQLGCGTLM ISIMWLLKLH PRPKVTPSQL PAILQLAAAH TLGNLLTNVS LGRVNVSFTH TIKAMEPFFT VLFSVLLLGE WPSLWIVCSL
201: LPIVAGVSLA SFTEASFNWI GFCSAMASNV TNQSRNVLSK KFMVEKEALD NINLFSIITI ISFVLLVPVA ILIDGFKFTP SHLQLATSQG LTVKEFCLMS
301: LLAGVCLHSY QQVSYMILEM VSPVTHSVGN CVKRVVVIAS SILFFKTPVS PLNSIGTATA LAGVYLYTRA KRIKPNPNSK SS
001: MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP ENVEGGDLES GSLVKGLKLG GMFGVWYLLN IYYNIFNKQV
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS
Arabidopsis Description
PPT2Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.