Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020182.1-P | Field mustard | cytosol | 99.71 | 99.71 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 94.46 | 94.46 |
| CDX70995 | Canola | cytosol | 78.43 | 80.54 |
| CDX92368 | Canola | cytosol | 78.13 | 80.0 |
| CDX88803 | Canola | cytosol | 78.43 | 79.82 |
| AT5G22290.1 | Thale cress | cytosol | 79.01 | 79.71 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 64.14 | 64.9 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 62.97 | 63.91 |
| CDY34716 | Canola | nucleus | 49.85 | 58.16 |
| CDY70627 | Canola | cytosol | 21.28 | 44.24 |
| CDY41351 | Canola | plastid | 21.28 | 43.71 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 41.11 | 40.87 |
| CDY04487 | Canola | cytosol | 40.82 | 40.58 |
| CDY71253 | Canola | cytosol | 20.99 | 40.45 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 40.82 | 36.08 |
| KRH22653 | Soybean | nucleus | 38.48 | 35.58 |
| PGSC0003DMT400015077 | Potato | nucleus | 41.69 | 35.05 |
| Solyc06g074170.2.1 | Tomato | nucleus | 41.69 | 34.96 |
| CDX95832 | Canola | nucleus | 22.16 | 33.63 |
| CDX92153 | Canola | nucleus | 22.16 | 33.63 |
| PGSC0003DMT400050482 | Potato | nucleus | 41.69 | 33.26 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 41.11 | 31.19 |
| CDX77674 | Canola | nucleus | 25.66 | 30.99 |
| CDX90431 | Canola | nucleus | 25.66 | 30.77 |
| CDY01508 | Canola | nucleus | 25.36 | 30.42 |
| CDY63046 | Canola | nucleus | 25.66 | 30.34 |
| CDY59580 | Canola | nucleus | 25.66 | 29.93 |
| CDX87703 | Canola | nucleus | 25.07 | 29.25 |
| CDX78816 | Canola | nucleus | 24.2 | 28.42 |
| CDY44498 | Canola | nucleus | 24.2 | 28.42 |
| CDY66060 | Canola | nucleus | 23.62 | 28.32 |
| CDY67205 | Canola | nucleus | 23.62 | 28.32 |
| CDX84070 | Canola | nucleus | 23.32 | 28.27 |
| CDX86970 | Canola | nucleus | 24.49 | 26.58 |
| KRH26664 | Soybean | nucleus | 38.19 | 26.57 |
| CDY10502 | Canola | nucleus | 23.32 | 26.06 |
| CDX67739 | Canola | nucleus | 23.32 | 25.72 |
| CDY42413 | Canola | nucleus | 23.03 | 25.57 |
| CDX81124 | Canola | nucleus | 25.36 | 25.44 |
| CDY44793 | Canola | nucleus | 25.36 | 24.86 |
| CDY43785 | Canola | nucleus | 24.49 | 24.42 |
| CDX84485 | Canola | nucleus | 24.49 | 24.28 |
| CDY46459 | Canola | nucleus | 20.7 | 23.36 |
| CDY41352 | Canola | nucleus | 25.66 | 20.9 |
| CDY00676 | Canola | nucleus | 25.66 | 20.56 |
| CDY19828 | Canola | nucleus | 25.95 | 20.0 |
| CDY41353 | Canola | nucleus | 25.66 | 19.95 |
| CDX88115 | Canola | cytosol | 25.66 | 19.86 |
| CDX69911 | Canola | nucleus | 25.07 | 19.63 |
| CDX78356 | Canola | nucleus | 20.7 | 19.56 |
| CDY21575 | Canola | nucleus | 24.49 | 19.35 |
| CDX80455 | Canola | nucleus | 25.66 | 19.3 |
| CDY05939 | Canola | nucleus | 25.95 | 19.22 |
| CDY00208 | Canola | nucleus | 24.2 | 19.21 |
| CDY00946 | Canola | nucleus | 25.07 | 19.07 |
| CDX73920 | Canola | nucleus | 24.78 | 19.02 |
| CDY08601 | Canola | nucleus, plastid | 25.07 | 18.9 |
| CDY00677 | Canola | nucleus | 24.49 | 18.88 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 24.78 | 18.64 |
| CDY08139 | Canola | nucleus | 25.07 | 18.53 |
| CDY28745 | Canola | cytosol | 25.66 | 18.41 |
| CDY43143 | Canola | nucleus | 25.66 | 18.41 |
| CDY49932 | Canola | nucleus | 25.66 | 18.37 |
| CDX78734 | Canola | cytosol | 26.24 | 18.37 |
| CDX70745 | Canola | cytosol | 26.24 | 18.22 |
| CDY16943 | Canola | nucleus | 26.24 | 18.11 |
| CDY25752 | Canola | nucleus | 24.2 | 16.31 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 24.49 | 16.28 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 26.82 | 16.25 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 26.24 | 16.25 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 25.95 | 16.01 |
| CDY60870 | Canola | nucleus | 26.82 | 15.94 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 25.95 | 15.89 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 23.91 | 15.8 |
| CDX73305 | Canola | nucleus | 23.91 | 15.74 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 24.49 | 15.64 |
| CDY16427 | Canola | nucleus | 26.82 | 15.46 |
| CDY26922 | Canola | nucleus | 28.57 | 15.41 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 24.49 | 15.38 |
| CDY66161 | Canola | nucleus | 28.28 | 15.28 |
| CDY12515 | Canola | plastid | 24.2 | 15.23 |
| CDX93723 | Canola | nucleus | 24.2 | 14.93 |
| CDY70628 | Canola | golgi | 17.2 | 14.9 |
| CDY28397 | Canola | nucleus | 24.2 | 14.36 |
| CDX91785 | Canola | nucleus | 22.45 | 14.29 |
| CDX73304 | Canola | nucleus | 24.2 | 14.24 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 23.32 | 14.21 |
| CDY21216 | Canola | nucleus | 16.33 | 13.02 |
| CDX87118 | Canola | nucleus | 25.36 | 10.46 |
| CDX69392 | Canola | nucleus | 7.87 | 6.31 |
| CDX86969 | Canola | cytosol | 0.58 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078FB97 | UniProt:A0A078FB97 | EnsemblPlants:CDY09128 | ProteinID:CDY09128 |
| ProteinID:CDY09128.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00001356001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | UniParc:UPI0004EE0718 | : | : | : |
Description
BnaA02g05540DBnaA02g05540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB97]
Coordinates
chrLK031993:-:258422..260102
Molecular Weight (calculated)
38503.9 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.357
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAMGGFK DTAASVEAAT VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPETDIYN FEPWDLPDKS IVKSDTEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSSSQVIG TKRTLVFHIG RAPKGERTEW LMHEYCMKGV SMDDALVVCR LRRNKEFHTS TSQKAPEPDL PTEKHMVMQN GGAASSGSLT
201: DWDSMVDFYL AGESGEELLN EMAETSKNLQ VQTEDDFFAD ILKDEIINVD EAVTTGNLAN EVPTLESASK AIRVLPLPSM IDKQMASLLE ERPSEQKKCK
301: GSSGTDQLSS CFVGIYSIKT VNRARWDVII CLVALIVMFF CLE
101: GYWKATGKER DVKSSSQVIG TKRTLVFHIG RAPKGERTEW LMHEYCMKGV SMDDALVVCR LRRNKEFHTS TSQKAPEPDL PTEKHMVMQN GGAASSGSLT
201: DWDSMVDFYL AGESGEELLN EMAETSKNLQ VQTEDDFFAD ILKDEIINVD EAVTTGNLAN EVPTLESASK AIRVLPLPSM IDKQMASLLE ERPSEQKKCK
301: GSSGTDQLSS CFVGIYSIKT VNRARWDVII CLVALIVMFF CLE
001: MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
Arabidopsis Description
NAC089NAC domain-containing protein 89 [Source:UniProtKB/Swiss-Prot;Acc:Q94F58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.