CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033276.1-P	Field mustard	golgi, peroxisome, plasma membrane	100.0	100.0
CDY15191	Canola	cytosol, golgi, plasma membrane	87.15	99.36
AT1G01230.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	84.92	96.82
CDY37999	Canola	cytosol, golgi, mitochondrion, plasma membrane	77.65	88.53
CDX67521	Canola	cytosol, golgi, plasma membrane	70.39	81.82
CDY13373	Canola	cytosol, golgi, plasma membrane	69.83	81.17
CDY65660	Canola	endoplasmic reticulum, golgi, plasma membrane	68.16	78.71
CDY61368	Canola	cytosol, golgi, plasma membrane	67.6	78.57

Protein Annotations

EnsemblPlants:CDX90018	EnsemblPlantsGene:GSBRNA2T00150517001	GO:A0A078DS55	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:ORMDL
PANTHER:PTHR12665	PANTHER:PTHR12665:SF14	PFAM:PF04061	PIRSF:PIRSF018147	ProteinID:CDX90018	ProteinID:CDX90018.1
TMHMM:TMhelix	UniParc:UPI000254514C	MapMan:35.2	:	:	:

Description

BnaA10g00640D

Coordinates

chrLK031861:+:1284178..1285707

Molecular Weight (calculated)

20706.0 Da

IEP (calculated)

7.159

GRAVY (calculated)

0.072

Length

179 amino acids

Sequence
(BLAST)

001: MANLYVKAAP PPDMNRNTEW FMYPGVWTTY ILILFFGWLV VLSLSGCSPG MAWTVVNLAH FVSQQFFEID RFGSDDKAFD LDQAVTYHSF HWMKGTPFAD
101: DQGVYNGLTW WEQMDNGQQL TRNRKFLTVV PVVLYLIASH TTDYRHPWLF LNTLAVMVLV VAKFPNMHKV RIFGINGDK

Best Arabidopsis Sequence Match ( AT1G01230.1 )
(BLAST)

001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK

Arabidopsis Description

ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.