Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G01230.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 97.45 | 97.45 |
| CDY37999 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 89.17 | 89.17 |
| CDX90018 | Canola | golgi, peroxisome, plasma membrane | 99.36 | 87.15 |
| CDX67521 | Canola | cytosol, golgi, plasma membrane | 80.89 | 82.47 |
| CDY13373 | Canola | cytosol, golgi, plasma membrane | 80.25 | 81.82 |
| CDY65660 | Canola | endoplasmic reticulum, golgi, plasma membrane | 77.71 | 78.71 |
| CDY61368 | Canola | cytosol, golgi, plasma membrane | 77.07 | 78.57 |
Protein Annotations
| EnsemblPlants:CDY15191 | EnsemblPlantsGene:GSBRNA2T00085377001 | GO:A0A078FPZ0 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ORMDL |
| PANTHER:PTHR12665 | PANTHER:PTHR12665:SF14 | PFAM:PF04061 | PIRSF:PIRSF018147 | ProteinID:CDY15191 | ProteinID:CDY15191.1 |
| TMHMM:TMhelix | UniParc:UPI0004EB939F | UniProt:A0A078FPZ0 | MapMan:35.2 | : | : |
Description
BnaC05g00700DBnaC05g00700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPZ0]
Coordinates
chrLK032052:-:376085..377578
Molecular Weight (calculated)
18130.2 Da
IEP (calculated)
9.356
GRAVY (calculated)
0.204
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MANLYVKAAP PPDMNRNTEW FMYPGVWTTY ILILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GVYNGLTWWE QMDNGQQLTR
101: NRKFLTVVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTVVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.