Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021366.1-P | Field mustard | nucleus | 98.75 | 98.54 |
| CDY21216 | Canola | nucleus | 88.1 | 98.14 |
| AT3G03200.1 | Thale cress | nucleus | 88.31 | 88.31 |
| CDY43143 | Canola | nucleus | 87.06 | 87.24 |
| CDY28745 | Canola | cytosol | 86.64 | 86.82 |
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 17.12 | 70.69 |
| CDX70745 | Canola | cytosol | 64.09 | 62.15 |
| CDX78734 | Canola | cytosol | 63.05 | 61.63 |
| CDY16943 | Canola | nucleus | 63.47 | 61.17 |
| CDX92153 | Canola | nucleus | 26.51 | 56.19 |
| CDX95832 | Canola | nucleus | 26.51 | 56.19 |
| CDY71253 | Canola | cytosol | 20.88 | 56.18 |
| CDY70627 | Canola | cytosol | 18.58 | 53.94 |
| CDY41351 | Canola | plastid | 17.33 | 49.7 |
| CDX69392 | Canola | nucleus | 40.29 | 45.09 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 33.4 | 43.01 |
| GSMUA_Achr11P... | Banana | nucleus | 33.61 | 42.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.69 | 41.41 |
| CDY10502 | Canola | nucleus | 26.3 | 41.04 |
| CDY42413 | Canola | nucleus | 26.1 | 40.45 |
| CDX67739 | Canola | nucleus | 26.1 | 40.19 |
| CDX90431 | Canola | nucleus | 22.76 | 38.11 |
| CDY01508 | Canola | nucleus | 22.76 | 38.11 |
| CDX77674 | Canola | nucleus | 22.34 | 37.68 |
| CDY63046 | Canola | nucleus | 22.34 | 36.9 |
| CDY59580 | Canola | nucleus | 22.55 | 36.73 |
| CDX87703 | Canola | nucleus | 22.34 | 36.39 |
| CDX78816 | Canola | nucleus | 22.13 | 36.3 |
| CDY44498 | Canola | nucleus | 22.13 | 36.3 |
| CDX84070 | Canola | nucleus | 21.29 | 36.04 |
| CDY66060 | Canola | nucleus | 21.29 | 35.66 |
| CDY67205 | Canola | nucleus | 21.29 | 35.66 |
| PGSC0003DMT400055322 | Potato | nucleus | 41.75 | 35.59 |
| Solyc02g036430.1.1 | Tomato | nucleus | 40.71 | 34.51 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 46.14 | 32.89 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 45.51 | 32.63 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 45.72 | 32.3 |
| CDY60870 | Canola | nucleus | 38.2 | 31.72 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 42.38 | 31.52 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 36.53 | 31.47 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 41.96 | 31.26 |
| CDY16427 | Canola | nucleus | 38.2 | 30.76 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 38.62 | 30.48 |
| CDY46459 | Canola | nucleus | 19.0 | 29.93 |
| Os03t0119966-01 | Rice | nucleus | 38.83 | 28.62 |
| CDY44793 | Canola | nucleus | 20.88 | 28.57 |
| CDY43785 | Canola | nucleus | 20.25 | 28.2 |
| Zm00001d027395_P009 | Maize | nucleus | 39.04 | 28.16 |
| CDX84485 | Canola | nucleus | 20.25 | 28.03 |
| CDX86970 | Canola | nucleus | 18.37 | 27.85 |
| EER95621 | Sorghum | nucleus | 39.46 | 27.71 |
| CDX81124 | Canola | nucleus | 19.62 | 27.49 |
| Zm00001d048493_P004 | Maize | nucleus | 39.04 | 27.22 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 19.21 | 26.67 |
| CDY04487 | Canola | cytosol | 19.21 | 26.67 |
| CDX70995 | Canola | cytosol | 18.58 | 26.65 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 38.0 | 26.42 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 38.0 | 26.34 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 18.58 | 26.33 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 18.58 | 26.25 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 18.79 | 26.24 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 38.0 | 26.22 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 38.2 | 26.22 |
| CDX88803 | Canola | cytosol | 18.37 | 26.11 |
| CDX92368 | Canola | cytosol | 18.16 | 25.97 |
| CDY09128 | Canola | cytosol | 18.37 | 25.66 |
| CDY41352 | Canola | nucleus | 22.34 | 25.42 |
| CDY41353 | Canola | nucleus | 22.34 | 24.26 |
| CDY00946 | Canola | nucleus | 22.55 | 23.95 |
| CDY08601 | Canola | nucleus, plastid | 22.55 | 23.74 |
| CDY00676 | Canola | nucleus | 20.88 | 23.36 |
| CDX69911 | Canola | nucleus | 20.88 | 22.83 |
| CDY21575 | Canola | nucleus | 20.67 | 22.81 |
| CDY00677 | Canola | nucleus | 20.46 | 22.02 |
| CDY25752 | Canola | nucleus | 23.38 | 22.0 |
| CDX73920 | Canola | nucleus | 20.46 | 21.92 |
| CDX88115 | Canola | cytosol | 20.25 | 21.9 |
| CDY19828 | Canola | nucleus | 20.25 | 21.8 |
| CDX78356 | Canola | nucleus | 16.49 | 21.76 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 23.38 | 21.71 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 23.38 | 21.58 |
| CDY00208 | Canola | nucleus | 19.42 | 21.53 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 20.46 | 21.49 |
| CDX80455 | Canola | nucleus | 20.46 | 21.49 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 24.63 | 21.22 |
| CDY34716 | Canola | nucleus | 12.94 | 21.09 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 24.22 | 20.94 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 24.43 | 20.89 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 24.63 | 20.85 |
| CDY12515 | Canola | plastid | 23.38 | 20.55 |
| CDX93723 | Canola | nucleus | 23.59 | 20.32 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 22.96 | 20.15 |
| CDY05939 | Canola | nucleus | 19.42 | 20.09 |
| CDY08139 | Canola | nucleus | 19.42 | 20.04 |
| CDX73305 | Canola | nucleus | 21.71 | 19.96 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 22.34 | 19.93 |
| CDY70628 | Canola | golgi | 16.28 | 19.7 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 22.96 | 19.54 |
| CDX91785 | Canola | nucleus | 21.92 | 19.48 |
| CDY28397 | Canola | nucleus | 23.17 | 19.2 |
| CDX73304 | Canola | nucleus | 22.96 | 18.87 |
| Solyc02g081270.2.1 | Tomato | nucleus | 40.29 | 18.76 |
| CDY66161 | Canola | nucleus | 22.76 | 17.17 |
| CDY26922 | Canola | nucleus | 22.76 | 17.14 |
| CDX87118 | Canola | nucleus | 19.83 | 11.42 |
| CDX86969 | Canola | cytosol | 1.25 | 5.61 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078IJ23 | UniProt:A0A078IJ23 | EnsemblPlants:CDY49932 | ProteinID:CDY49932 |
| ProteinID:CDY49932.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00094099001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EEA0C5 | SEG:seg | : | : |
Description
BnaCnng18420DBnaCnng18420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ23]
Coordinates
chrLK032869:-:38687..41234
Molecular Weight (calculated)
55301.3 Da
IEP (calculated)
5.065
GRAVY (calculated)
-0.696
Length
479 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELI TFYLKRKING LEIELEVIAE VDLYKCEPWD LPGKALLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETQCEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NSSFDACSDL EISSTTHQVQ
201: NAFQPRFGNG RFNSNAMISN EDWSQYYGSS YAPFPTPYKV NNEIECSMLQ HNMSLPPLRV ENSAVSDCDF FTSMTQNNNH GVLEDFTFAT SGSNHYNSVG
301: DQVIHIGNYD EPPLMMSNHH MNQGYTEEQK IISTLDDTEQ DVGYHGDNTN DNINIDDFFS FDIYNEENIN QVEGNEEEVN TNETLDSSHF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP SHTLKVHINP INQNVEERTL FIEEDNDSWL QRAEKITKTK LTLVGVLAQQ CYKYLAIFF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETQCEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NSSFDACSDL EISSTTHQVQ
201: NAFQPRFGNG RFNSNAMISN EDWSQYYGSS YAPFPTPYKV NNEIECSMLQ HNMSLPPLRV ENSAVSDCDF FTSMTQNNNH GVLEDFTFAT SGSNHYNSVG
301: DQVIHIGNYD EPPLMMSNHH MNQGYTEEQK IISTLDDTEQ DVGYHGDNTN DNINIDDFFS FDIYNEENIN QVEGNEEEVN TNETLDSSHF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP SHTLKVHINP INQNVEERTL FIEEDNDSWL QRAEKITKTK LTLVGVLAQQ CYKYLAIFF
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
Arabidopsis Description
NAC045NAC045 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.