Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 14.67 | 84.48 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 61.38 | 63.66 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 59.88 | 62.21 |
| VIT_17s0053g00740.t01 | Wine grape | nucleus | 22.01 | 61.76 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 59.88 | 59.52 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 59.73 | 58.85 |
| GSMUA_Achr11P... | Banana | nucleus | 33.38 | 58.22 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 32.34 | 58.06 |
| PGSC0003DMT400055322 | Potato | nucleus | 48.5 | 57.65 |
| Solyc02g036430.1.1 | Tomato | nucleus | 48.05 | 56.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.19 | 54.93 |
| VIT_19s0085g00950.t01 | Wine grape | nucleus | 22.9 | 54.45 |
| VIT_15s0048g02310.t01 | Wine grape | cytosol | 12.13 | 49.09 |
| Bra039745.1-P | Field mustard | nucleus | 39.97 | 48.9 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 42.66 | 46.95 |
| Os03t0119966-01 | Rice | nucleus | 45.36 | 46.62 |
| CDY60870 | Canola | nucleus | 40.12 | 46.45 |
| AT1G65910.1 | Thale cress | nucleus | 43.71 | 46.28 |
| AT5G17260.1 | Thale cress | nucleus | 32.63 | 45.8 |
| Bra021366.1-P | Field mustard | nucleus | 32.78 | 45.62 |
| CDY43143 | Canola | nucleus | 32.63 | 45.61 |
| CDY49932 | Canola | nucleus | 32.63 | 45.51 |
| CDY28745 | Canola | cytosol | 32.34 | 45.19 |
| Bra032009.1-P | Field mustard | nucleus | 32.34 | 45.19 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 37.57 | 45.14 |
| AT3G03200.1 | Thale cress | nucleus | 32.19 | 44.89 |
| CDY16427 | Canola | nucleus | 39.97 | 44.87 |
| CDY16943 | Canola | nucleus | 33.38 | 44.87 |
| EER95621 | Sorghum | nucleus | 45.06 | 44.13 |
| CDX70745 | Canola | cytosol | 32.48 | 43.93 |
| Bra006392.1-P | Field mustard | cytosol | 32.19 | 43.88 |
| CDX78734 | Canola | cytosol | 32.19 | 43.88 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 44.61 | 43.13 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 44.76 | 42.84 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 44.46 | 42.8 |
| Zm00001d048493_P004 | Maize | nucleus | 44.01 | 42.79 |
| Bra008567.1-P | Field mustard | nucleus | 28.29 | 42.28 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 43.56 | 42.24 |
| Zm00001d027395_P009 | Maize | nucleus | 41.32 | 41.57 |
| CDY21216 | Canola | nucleus | 25.9 | 40.23 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 21.41 | 39.18 |
| Solyc02g081270.2.1 | Tomato | nucleus | 47.16 | 30.61 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 16.77 | 28.87 |
| VIT_15s0048g02290.t01 | Wine grape | nucleus | 13.47 | 28.04 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 16.92 | 26.16 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 21.56 | 25.76 |
| VIT_15s0048g02320.t01 | Wine grape | nucleus | 13.32 | 25.21 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 21.26 | 24.83 |
| VIT_15s0048g02280.t01 | Wine grape | golgi, nucleus, plasma membrane | 17.37 | 22.7 |
| VIT_15s0048g02300.t01 | Wine grape | nucleus | 14.52 | 22.1 |
| VIT_02s0025g03020.t01 | Wine grape | nucleus | 20.21 | 21.36 |
| VIT_04s0044g01220.t01 | Wine grape | nucleus | 17.52 | 20.89 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 18.11 | 18.79 |
| VIT_15s0048g02270.t01 | Wine grape | nucleus | 17.22 | 18.31 |
Protein Annotations
| EntrezGene:100258199 | wikigene:100258199 | MapMan:15.5.17 | Gene3D:3.30.310.150 | ProteinID:CCB51110 | ProteinID:CCB51110.1 |
| UniProt:F6HFV8 | EMBL:FN595753 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003441 |
| InterPro:IPR036093 | EntrezGene:LOC100258199 | wikigene:LOC100258199 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0001985F10 | ArrayExpress:VIT_04s0079g00280 |
| EnsemblPlantsGene:VIT_04s0079g00280 | EnsemblPlants:VIT_04s0079g00280.t01 | RefSeq:XP_002267333 | RefSeq:XP_002267333.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr4:-:10642795..10646819
Molecular Weight (calculated)
76013.5 Da
IEP (calculated)
5.156
GRAVY (calculated)
-0.525
Length
668 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWD LPGKSLLPSK DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS
101: QRRAVGMKKT LVYYRGRAPH GARTDWVMHE YRLDERECEI VSGLQDAYAL CRVFKKTASG PKIGEHYATT TTNQMSSDHS SSMELYSEGR CEDLESSDYP
201: ISLDTCSPSL MNGPSADINA TRDGKWMQFL SDEAFYFPTP SLPNYGTMSY PPSKVDVALE CARLQHRFSL PPLEVEDFPQ VGVTNFKAPQ PASICGSTEA
301: DILQEILSVA HASQELINQS SVPNLWDENY AADDDFTFMT GKETYYNQFN NMNSLRLIDK SWEHQNTSSI EIGHLDEDFK TSERMVENLR WVGMSNKDLN
401: ENFIEEHKIV PIEHISSFQS KLEHEAQGQT DSRENLKELN DSELNDFPLG FINDDPNENF IEDGNEDDFS NTQSFEVFEK IEVNHGMFVS TRQVAETFFH
501: QIEPSQTVKV HLNPVITNNL SIENSGTQIR SKSGSSFFRK FKAFGRGKFI GITKSIEPCR NIANTITGIV AFLLTCCVYL GENPEGEKLM DYFPETREMV
601: KQGEEGCSFS IRTVKIAGKT ECIDEKENVW FIKIRGSFIF SALLKKMGPL LTIALALCSI WAHHILPS
101: QRRAVGMKKT LVYYRGRAPH GARTDWVMHE YRLDERECEI VSGLQDAYAL CRVFKKTASG PKIGEHYATT TTNQMSSDHS SSMELYSEGR CEDLESSDYP
201: ISLDTCSPSL MNGPSADINA TRDGKWMQFL SDEAFYFPTP SLPNYGTMSY PPSKVDVALE CARLQHRFSL PPLEVEDFPQ VGVTNFKAPQ PASICGSTEA
301: DILQEILSVA HASQELINQS SVPNLWDENY AADDDFTFMT GKETYYNQFN NMNSLRLIDK SWEHQNTSSI EIGHLDEDFK TSERMVENLR WVGMSNKDLN
401: ENFIEEHKIV PIEHISSFQS KLEHEAQGQT DSRENLKELN DSELNDFPLG FINDDPNENF IEDGNEDDFS NTQSFEVFEK IEVNHGMFVS TRQVAETFFH
501: QIEPSQTVKV HLNPVITNNL SIENSGTQIR SKSGSSFFRK FKAFGRGKFI GITKSIEPCR NIANTITGIV AFLLTCCVYL GENPEGEKLM DYFPETREMV
601: KQGEEGCSFS IRTVKIAGKT ECIDEKENVW FIKIRGSFIF SALLKKMGPL LTIALALCSI WAHHILPS
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.