Factsheet for Solyc02g036430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055322	Potato	nucleus	96.46	96.98
Solyc03g098190.2.1	Tomato	nucleus	24.25	55.02
GSMUA_Achr1P02820_001	Banana	nucleus	35.93	54.57
GSMUA_Achr11P...	Banana	nucleus	35.75	52.74
Solyc03g078120.2.1	Tomato	cytosol	13.98	52.67
GSMUA_AchrUn_...	Banana	nucleus	31.86	50.7
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	56.81	48.05
KRH17271	Soybean	cytosol, nucleus, plasma membrane	53.1	46.58
KRH72917	Soybean	cytosol, nucleus, plasma membrane	52.04	45.72
KRH30885	Soybean	cytosol, nucleus, vacuole	53.63	45.09
KRG98003	Soybean	cytosol, nucleus, plasma membrane	53.98	44.99
Bra039745.1-P	Field mustard	nucleus	40.18	41.58
CDY28745	Canola	cytosol	34.87	41.21
CDY43143	Canola	nucleus	34.87	41.21
AT5G17260.1	Thale cress	nucleus	34.69	41.18
Bra021366.1-P	Field mustard	nucleus	34.87	41.04
Bra032009.1-P	Field mustard	nucleus	34.51	40.8
CDY49932	Canola	nucleus	34.51	40.71
AT3G03200.1	Thale cress	nucleus	34.34	40.5
CDY16943	Canola	nucleus	35.58	40.44
CDX78734	Canola	cytosol	34.51	39.8
Bra006392.1-P	Field mustard	cytosol	34.51	39.8
CDX70745	Canola	cytosol	34.69	39.68
GSMUA_Achr8P13430_001	Banana	nucleus	42.3	39.37
CDY60870	Canola	nucleus	40.18	39.34
Solyc08g077110.2.1	Tomato	nucleus	23.19	38.53
CDY16427	Canola	nucleus	40.53	38.49
AT1G65910.1	Thale cress	nucleus	42.65	38.19
Os03t0119966-01	Rice	nucleus	43.89	38.15
Solyc06g061080.2.1	Tomato	nucleus	22.3	37.39
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	36.46	37.05
Bra008567.1-P	Field mustard	nucleus	29.2	36.91
EER95621	Sorghum	nucleus	44.42	36.8
Zm00001d027395_P009	Maize	nucleus	43.01	36.6
Zm00001d048493_P004	Maize	nucleus	43.72	35.95
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	43.89	35.89
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	44.25	35.82
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	43.54	35.7
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	43.72	35.59
CDY21216	Canola	nucleus	26.37	34.65
Solyc02g081270.2.1	Tomato	nucleus	53.63	29.45
Solyc05g055480.2.1	Tomato	nucleus	19.65	28.76
Solyc06g074170.2.1	Tomato	nucleus	18.23	25.18
Solyc11g008010.1.1	Tomato	endoplasmic reticulum, plasma membrane	20.53	24.95
Solyc11g008000.1.1	Tomato	nucleus	22.48	24.05
Solyc11g068750.1.1	Tomato	nucleus, plasma membrane	18.41	23.01
Solyc05g055470.2.1	Tomato	nucleus	21.42	22.24
Solyc12g056790.1.1	Tomato	nucleus	21.95	21.02
Solyc04g072220.2.1	Tomato	cytosol, nucleus, plastid	21.95	20.7
Solyc06g073050.2.1	Tomato	nucleus	20.53	19.5
Solyc03g080090.2.1	Tomato	nucleus	21.42	19.24
Solyc11g005920.1.1	Tomato	nucleus	19.47	16.01

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	UniProt:K4B5T6	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941	EnsemblPlantsGene:Solyc02g036430.1	EnsemblPlants:Solyc02g036430.1.1
UniParc:UPI000276773D	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:30760720..30764488

Molecular Weight (calculated)

64876.5 Da

IEP (calculated)

5.119

GRAVY (calculated)

-0.738

Length

565 amino acids

Sequence
(BLAST)

001: MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPDKSLLPSK DMEWYFFSPR DRKYPNGTRT NRATKAGYWK ATGKDRKVNS
101: QMRPIGMKKT LVYYRGRAPH GTRTGWVMHE YRLEERECEV ANGLQDAYAL CRVFKKSLNV PKIGDHYGSD RSGCSINDQL YTEGRGEDCD YGMMTTTTSS
201: SSRLLHGSPL MNHAAPTPTN DDNKWMQYLS DEANYTFNNN PSFATNGHFP YNHPSKVDIA LECARLQHRF ALPPLEVQDF PQVGYVMSQS NDVMYHQSTT
301: SQTDIVQEIL SVAQASHDLT NQEYSWDGNY NNINYGDDFS FLPHSHNNNH DLGNSFNFMD QLKEDDDQNN SIPIADFDED FKSETMVERL RWVGMSQKDD
401: KAFLEDYKTV PIENISGPHK EEQDQLQGEA SGQQNNMNET EANNFSLGFG NDDNFLDDEE TDGFSSSPSF EVYEKIEVNQ GMFIATRQVA NTFYHQVAPS
501: KTVTIHRDMV TMHDFPIRKI TKSATFLDTF MAFSRKTLSR VVMRVNTLVE LIAPLHTFWT ILENA

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.