Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400018364 | Potato | mitochondrion, nucleus | 15.65 | 75.0 |
| GSMUA_Achr9P23940_001 | Banana | cytosol | 23.92 | 55.19 |
| GSMUA_Achr3P13880_001 | Banana | cytosol | 23.38 | 54.17 |
| GSMUA_Achr11P... | Banana | nucleus | 35.61 | 51.7 |
| GSMUA_Achr1P02820_001 | Banana | nucleus | 34.17 | 51.08 |
| GSMUA_Achr11P... | Banana | cytosol | 16.01 | 47.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.5 | 46.2 |
| GSMUA_Achr8P13430_001 | Banana | nucleus | 48.56 | 44.48 |
| GSMUA_Achr6P03200_001 | Banana | cytosol | 16.91 | 44.13 |
| Os03t0119966-01 | Rice | nucleus | 50.18 | 42.92 |
| GSMUA_Achr10P... | Banana | nucleus | 19.78 | 42.8 |
| EER95621 | Sorghum | nucleus | 51.26 | 41.79 |
| Zm00001d048493_P004 | Maize | nucleus | 51.44 | 41.63 |
| HORVU4Hr1G085320.1 | Barley | cytosol, nucleus, peroxisome | 50.0 | 40.35 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 50.0 | 40.23 |
| Zm00001d027395_P009 | Maize | nucleus | 48.02 | 40.21 |
| TraesCS4D01G345300.1 | Wheat | cytosol, nucleus, peroxisome | 50.18 | 39.97 |
| TraesCS5A01G519300.1 | Wheat | cytosol, nucleus, peroxisome | 49.82 | 39.91 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 17.63 | 39.52 |
| VIT_04s0079g00280.t01 | Wine grape | cytosol, nucleus, plasma membrane | 45.14 | 37.57 |
| AT5G17260.1 | Thale cress | nucleus | 31.65 | 36.97 |
| Bra021366.1-P | Field mustard | nucleus | 31.65 | 36.67 |
| PGSC0003DMT400055322 | Potato | nucleus | 37.05 | 36.65 |
| CDY49932 | Canola | nucleus | 31.47 | 36.53 |
| Solyc02g036430.1.1 | Tomato | nucleus | 37.05 | 36.46 |
| AT3G03200.1 | Thale cress | nucleus | 31.12 | 36.12 |
| CDY16943 | Canola | nucleus | 32.01 | 35.81 |
| Bra032009.1-P | Field mustard | nucleus | 30.58 | 35.56 |
| CDY43143 | Canola | nucleus | 30.4 | 35.36 |
| CDY28745 | Canola | cytosol | 30.22 | 35.15 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 40.65 | 35.09 |
| Bra039745.1-P | Field mustard | nucleus | 34.17 | 34.8 |
| CDX70745 | Canola | cytosol | 30.76 | 34.62 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 39.93 | 34.53 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 41.01 | 33.93 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 41.37 | 33.92 |
| Bra006392.1-P | Field mustard | cytosol | 29.86 | 33.88 |
| CDX78734 | Canola | cytosol | 29.86 | 33.88 |
| CDY60870 | Canola | nucleus | 34.17 | 32.93 |
| CDY16427 | Canola | nucleus | 34.53 | 32.27 |
| AT1G65910.1 | Thale cress | nucleus | 36.51 | 32.17 |
| Bra008567.1-P | Field mustard | nucleus | 25.36 | 31.54 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 20.68 | 30.75 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 16.01 | 30.69 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 19.6 | 30.45 |
| CDY21216 | Canola | nucleus | 23.2 | 30.0 |
| GSMUA_Achr11P... | Banana | nucleus | 20.32 | 28.54 |
| GSMUA_Achr7P23330_001 | Banana | nucleus | 20.5 | 27.94 |
| GSMUA_Achr11P... | Banana | nucleus | 20.68 | 26.26 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.12 | 21.62 |
| GSMUA_Achr5P23620_001 | Banana | nucleus | 20.14 | 21.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 17.81 | 20.71 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 21.76 | 20.61 |
| Solyc02g081270.2.1 | Tomato | nucleus | 37.95 | 20.51 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 21.4 | 20.07 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 20.32 | 19.69 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 20.14 | 19.48 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 19.42 | 18.0 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 20.68 | 17.94 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 21.22 | 15.55 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr11G16860_001 |
| EnsemblPlants:GSMUA_Achr11P16860_001 | EnsemblPlants:GSMUA_Achr11T16860_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0RSW6 | InterPro:NAC-dom |
| InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 |
| UniParc:UPI000296351D | SEG:seg | : | : | : | : |
Description
no apical meristem protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G16860_001]
Coordinates
chr11:-:18565936..18568542
Molecular Weight (calculated)
62892.0 Da
IEP (calculated)
8.261
GRAVY (calculated)
-0.426
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVSLPPGF RFHPTDEELI VYYLKRKING RMIELEIIPE VDLYKCEPWD LPGTNICKDL EWYFFSPRDR KYPNGSRTNR ATQAGYWKAT GKDRKVNSQR
101: RAVGMKKTLV FYGGRAPHGS RTDWVMHEYR LDEKECENAA SGLQVCDAYA LCRVFKKTAP GPKIIEQYGA PYQAHSQWID GAFPNDACSS VMMQGASLDA
201: TTPVVGNRMP HASEQTLGGG SFSYTPTKVD MVVQCARVQH RLSLPPSEVE EFPHFMHPGN FLETSNQVDT FPLVNSTDMW VGTNPHFDEL SSLLELDRGD
301: DERGTRFFQR TDCVSSGNFG EPTKLIEITE ATYVILVFFT LRSVLFVSQM DESRALLDGI DAKPIFSQSQ PDEFAVGFVD IDHETDMFAA TTPEFDACNK
401: VEFNHGLFVS HAGKTKTFFH HVEPSKKVSF HLNPTGRQDA VAETSELATK AGGRFSFFSR FKAFVRDKLM GKSSLLRNGR RVNEMLEIVA VLRTETAYSI
501: MNMKKKKKKK AKETWKCRGS VQESNIWFPD VSMRGISRMF LRGKLPFLAF ASGVNH
101: RAVGMKKTLV FYGGRAPHGS RTDWVMHEYR LDEKECENAA SGLQVCDAYA LCRVFKKTAP GPKIIEQYGA PYQAHSQWID GAFPNDACSS VMMQGASLDA
201: TTPVVGNRMP HASEQTLGGG SFSYTPTKVD MVVQCARVQH RLSLPPSEVE EFPHFMHPGN FLETSNQVDT FPLVNSTDMW VGTNPHFDEL SSLLELDRGD
301: DERGTRFFQR TDCVSSGNFG EPTKLIEITE ATYVILVFFT LRSVLFVSQM DESRALLDGI DAKPIFSQSQ PDEFAVGFVD IDHETDMFAA TTPEFDACNK
401: VEFNHGLFVS HAGKTKTFFH HVEPSKKVSF HLNPTGRQDA VAETSELATK AGGRFSFFSR FKAFVRDKLM GKSSLLRNGR RVNEMLEIVA VLRTETAYSI
501: MNMKKKKKKK AKETWKCRGS VQESNIWFPD VSMRGISRMF LRGKLPFLAF ASGVNH
001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I
Arabidopsis Description
anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.