Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P18070_001 | Banana | nucleus | 35.29 | 53.23 |
GSMUA_Achr5P03360_001 | Banana | nucleus | 47.06 | 49.16 |
CDY01508 | Canola | nucleus | 34.76 | 45.45 |
CDX90431 | Canola | nucleus | 34.76 | 45.45 |
Bra012626.1-P | Field mustard | nucleus | 34.49 | 45.1 |
GSMUA_Achr11P... | Banana | nucleus | 47.59 | 44.95 |
AT4G17980.2 | Thale cress | nucleus | 34.76 | 44.52 |
Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 36.9 | 44.37 |
CDX77674 | Canola | nucleus | 33.69 | 44.37 |
CDX78816 | Canola | nucleus | 34.49 | 44.18 |
Bra013272.1-P | Field mustard | nucleus | 34.49 | 44.18 |
CDY44498 | Canola | nucleus | 34.22 | 43.84 |
Bra025012.1-P | Field mustard | nucleus | 33.96 | 43.79 |
CDY63046 | Canola | nucleus | 33.96 | 43.79 |
VIT_02s0012g01040.t01 | Wine grape | nucleus | 42.51 | 43.56 |
GSMUA_Achr3P13880_001 | Banana | cytosol | 27.81 | 43.33 |
KRH04320 | Soybean | nucleus | 39.57 | 43.27 |
KRH58218 | Soybean | nucleus | 39.84 | 43.19 |
Bra035488.1-P | Field mustard | nucleus | 32.89 | 43.01 |
AT5G46590.1 | Thale cress | nucleus | 33.42 | 42.81 |
CDY66060 | Canola | nucleus | 32.62 | 42.66 |
CDY67205 | Canola | nucleus | 32.62 | 42.66 |
EER94455 | Sorghum | nucleus | 40.11 | 42.49 |
AT1G32510.1 | Thale cress | nucleus | 32.09 | 42.4 |
Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 38.77 | 42.27 |
CDX84070 | Canola | nucleus | 31.82 | 42.05 |
PGSC0003DMT400045129 | Potato | nucleus | 37.43 | 42.04 |
Bra022046.1-P | Field mustard | nucleus | 32.89 | 41.84 |
CDY59580 | Canola | nucleus | 32.89 | 41.84 |
CDX87703 | Canola | nucleus | 32.62 | 41.5 |
GSMUA_Achr9P23940_001 | Banana | cytosol | 26.74 | 41.49 |
TraesCS1A01G190100.1 | Wheat | nucleus | 37.17 | 41.49 |
Solyc08g077110.2.1 | Tomato | nucleus | 37.7 | 41.47 |
Solyc06g061080.2.1 | Tomato | nucleus | 36.9 | 40.95 |
GSMUA_Achr11P... | Banana | cytosol | 20.05 | 39.68 |
TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 37.97 | 38.9 |
HORVU1Hr1G049840.3 | Barley | cytosol | 36.9 | 38.66 |
TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 37.43 | 38.15 |
GSMUA_Achr6P03200_001 | Banana | cytosol | 21.66 | 38.03 |
GSMUA_Achr10P... | Banana | nucleus | 25.4 | 36.97 |
GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 22.99 | 29.66 |
GSMUA_Achr1P02820_001 | Banana | nucleus | 29.41 | 29.57 |
GSMUA_AchrUn_... | Banana | nucleus | 27.81 | 29.3 |
GSMUA_Achr11P... | Banana | nucleus | 29.68 | 28.98 |
GSMUA_Achr7P23330_001 | Banana | nucleus | 24.6 | 22.55 |
TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 24.06 | 22.0 |
TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 24.06 | 22.0 |
TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 24.06 | 22.0 |
GSMUA_Achr11P... | Banana | nucleus | 25.13 | 21.46 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 30.75 | 20.68 |
GSMUA_Achr8P13430_001 | Banana | nucleus | 32.09 | 19.77 |
GSMUA_AchrUn_... | Banana | nucleus | 26.2 | 17.22 |
GSMUA_Achr5P23620_001 | Banana | nucleus | 24.06 | 16.89 |
GSMUA_Achr1P03560_001 | Banana | nucleus | 25.67 | 16.72 |
GSMUA_Achr4P29170_001 | Banana | nucleus | 24.87 | 16.17 |
GSMUA_AchrUn_... | Banana | nucleus | 20.59 | 16.11 |
GSMUA_Achr8P24280_001 | Banana | nucleus | 24.33 | 15.5 |
GSMUA_Achr9P23580_001 | Banana | plastid | 24.06 | 15.18 |
GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 21.39 | 13.33 |
GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 26.2 | 12.91 |
GSMUA_Achr2P04010_001 | Banana | plastid | 21.39 | 12.48 |
Protein Annotations
MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G18140_001 |
EnsemblPlants:GSMUA_Achr5P18140_001 | EnsemblPlants:GSMUA_Achr5T18140_001 | InterPro:IPR003441 | InterPro:IPR036093 | UniProt:M0SZJ3 | InterPro:NAC-dom |
InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 |
UniParc:UPI0002961574 | : | : | : | : | : |
Description
Putative Whole genome shotgun sequence of line PN40024, scaffold_12.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr5G18140_001]
Coordinates
chr5:-:19440554..19442734
Molecular Weight (calculated)
41770.1 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.385
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSVSLPPGF RFRPTDDELV GYYLKRKVAG LSIELEIIPV IELYKYDPWD LPDYYQHFLV LSAPIKLVCE VSDRSVTLYF SIGYLEWFFF CPRDRKYPNG
101: TRTNRATGSG YWKATGKDRK IACEPSVYGV RKTLVFYRGR APGGERTGWV MHEYRLCEDL YQGSTNFLGA FALCRVVKKN DHGLKAGDPH AESKAKRCSS
201: SAAESGYRGY IDNVLSISEE NSTVVTNVSE KNEDSTPITS PETGRDVQLQ PIMKGFWESQ MVANASKTSP DESISKSVIT VGNTNVTESP TPGNLSPSHV
301: VNLMEEDFMV DELSWSGSLP SFPSPTSCMG FYGNAENITF HSLELDVPKH LNASYSASEG EDLSLWLQED ILVK
101: TRTNRATGSG YWKATGKDRK IACEPSVYGV RKTLVFYRGR APGGERTGWV MHEYRLCEDL YQGSTNFLGA FALCRVVKKN DHGLKAGDPH AESKAKRCSS
201: SAAESGYRGY IDNVLSISEE NSTVVTNVSE KNEDSTPITS PETGRDVQLQ PIMKGFWESQ MVANASKTSP DESISKSVIT VGNTNVTESP TPGNLSPSHV
301: VNLMEEDFMV DELSWSGSLP SFPSPTSCMG FYGNAENITF HSLELDVPKH LNASYSASEG EDLSLWLQED ILVK
001: MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
101: KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF
201: KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH VEFPVSSCYF NVDQDIDQSM QTGYWTNYEN DQTGSFDYSN LF
Arabidopsis Description
anac071NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.