Factsheet for TraesCSU01G168500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytoskeleton 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, nucleus, peroxisome
Any Predictor:	cytoskeleton, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G163300.1	Wheat	cytoskeleton, nucleus, peroxisome	100.0	100.0
TraesCSU01G215800.1	Wheat	cytoskeleton, nucleus, peroxisome	100.0	100.0
GSMUA_Achr3P18070_001	Banana	nucleus	20.54	33.87
CDX78816	Canola	nucleus	21.76	30.48
CDY44498	Canola	nucleus	21.76	30.48
Bra013272.1-P	Field mustard	nucleus	21.76	30.48
AT4G17980.2	Thale cress	nucleus	21.76	30.48
CDX77674	Canola	nucleus	21.03	30.28
CDX90431	Canola	nucleus	21.03	30.07
AT1G32510.1	Thale cress	nucleus	20.78	30.04
CDY63046	Canola	nucleus	21.27	30.0
CDY01508	Canola	nucleus	20.78	29.72
Bra012626.1-P	Field mustard	nucleus	20.78	29.72
Bra025012.1-P	Field mustard	nucleus	21.03	29.66
Bra022046.1-P	Field mustard	nucleus	21.27	29.59
CDX87703	Canola	nucleus	21.27	29.59
CDY59580	Canola	nucleus	21.27	29.59
CDX84070	Canola	nucleus	20.05	28.98
Zm00001d047050_P001	Maize	cytosol, nucleus, plastid	22.0	28.94
CDY67205	Canola	nucleus	20.05	28.67
Bra035488.1-P	Field mustard	nucleus	20.05	28.67
CDY66060	Canola	nucleus	20.05	28.67
AT5G46590.1	Thale cress	nucleus	20.29	28.42
KRH04320	Soybean	nucleus	23.23	27.78
KRH58218	Soybean	nucleus	23.23	27.54
Zm00001d030023_P001	Maize	cytosol, nucleus, plastid	22.98	27.41
VIT_02s0012g01040.t01	Wine grape	nucleus	24.45	27.4
PGSC0003DMT400045129	Potato	nucleus	22.0	27.03
Solyc08g077110.2.1	Tomato	nucleus	22.25	26.76
EER94455	Sorghum	nucleus	22.98	26.63
Solyc06g061080.2.1	Tomato	nucleus	21.52	26.11
HORVU1Hr1G049840.3	Barley	cytosol	22.74	26.05
TraesCS1B01G192200.1	Wheat	cytosol, nucleus, plastid	23.23	26.03
GSMUA_Achr5P03360_001	Banana	nucleus	21.76	24.86
GSMUA_Achr5P18140_001	Banana	nucleus	22.0	24.06
GSMUA_Achr11P...	Banana	nucleus	22.98	23.74
TraesCSU01G137200.2	Wheat	cytosol, nucleus, plastid	21.76	21.92
TraesCSU01G135000.1	Wheat	nucleus	23.72	13.68

Protein Annotations

EnsemblPlants:TraesCSU01G168500.1	EnsemblPlantsGene:TraesCSU01G168500	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PANTHER:PTHR31989	PANTHER:PTHR31989:SF14
PFAM:PF02365	PFscan:PS51005	SUPFAM:SSF101941	MapMan:15.5.17	:	:

Description

No Description!

Coordinates

chrUn:-:247896716..247898337

Molecular Weight (calculated)

45358.3 Da

IEP (calculated)

5.860

GRAVY (calculated)

-0.467

Length

409 amino acids

Sequence
(BLAST)

001: MSDIAPVQPL ALGLLQPEPG FRFHPTGQEL VTYDLLRKVH GHHAFIPEVH VYKHEPWELP GTSPTCPYLQ RRPGPIISSI DLIFINHACA DKSFSPSTHD
101: AGAKVEWYFF AVRARKYPNG LRMGRATVAG FWKSTGKDRP VMHNGVIVGM KKTLVFHTGR APGGTRTDWV MHEYRLQGQR NHHIQDAYAL CRVFKKNTVA
201: PLIDLSSDAD TYEDPMQSVP GGVDTDKDLM EHVSDGADSH KDPKHYVLGG IESDKYLIQS VLRGIGTHND PILVESDVAY AGKEQMESVL CGVGTDKDHI
301: HVESEFNSVH AGKGKKPFLA DRGSTSTGNM EFLAGGANKD NEGMQPVYAG ASADEENSVN AWYTAALAEE DNSWMQPPSY DDWYTRVDLD KDDSLMQFIF
401: GDVMLLSTD

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.