Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66060 | Canola | nucleus | 100.0 | 100.0 |
| Bra035488.1-P | Field mustard | nucleus | 97.55 | 97.55 |
| CDX84070 | Canola | nucleus | 95.45 | 96.47 |
| AT1G32510.1 | Thale cress | nucleus | 78.32 | 79.15 |
| CDY71253 | Canola | cytosol | 31.47 | 50.56 |
| CDX90431 | Canola | nucleus | 50.0 | 50.0 |
| CDX77674 | Canola | nucleus | 49.3 | 49.65 |
| CDY01508 | Canola | nucleus | 49.3 | 49.3 |
| CDY63046 | Canola | nucleus | 48.95 | 48.28 |
| GSMUA_Achr3P18070_001 | Banana | nucleus | 41.61 | 47.98 |
| CDX78816 | Canola | nucleus | 48.95 | 47.95 |
| CDY44498 | Canola | nucleus | 48.95 | 47.95 |
| CDY59580 | Canola | nucleus | 48.25 | 46.94 |
| CDY70627 | Canola | cytosol | 26.92 | 46.67 |
| CDX87703 | Canola | nucleus | 47.9 | 46.6 |
| CDY41351 | Canola | plastid | 26.92 | 46.11 |
| CDX92153 | Canola | nucleus | 36.01 | 45.58 |
| CDX95832 | Canola | nucleus | 36.01 | 45.58 |
| KRH04320 | Soybean | nucleus | 51.75 | 43.27 |
| KRH58218 | Soybean | nucleus | 51.4 | 42.61 |
| Solyc08g077110.2.1 | Tomato | nucleus | 48.95 | 41.18 |
| PGSC0003DMT400045129 | Potato | nucleus | 47.9 | 41.14 |
| Solyc06g061080.2.1 | Tomato | nucleus | 47.55 | 40.36 |
| VIT_02s0012g01040.t01 | Wine grape | nucleus | 50.35 | 39.45 |
| Zm00001d047050_P001 | Maize | cytosol, nucleus, plastid | 40.91 | 37.62 |
| TraesCS1A01G190100.1 | Wheat | nucleus | 41.96 | 35.82 |
| GSMUA_Achr5P03360_001 | Banana | nucleus | 44.06 | 35.2 |
| CDY10502 | Canola | nucleus | 36.36 | 33.88 |
| Zm00001d030023_P001 | Maize | cytosol, nucleus, plastid | 40.56 | 33.82 |
| CDX67739 | Canola | nucleus | 36.71 | 33.76 |
| EER94455 | Sorghum | nucleus | 41.61 | 33.71 |
| CDY42413 | Canola | nucleus | 36.01 | 33.33 |
| HORVU1Hr1G049840.3 | Barley | cytosol | 41.26 | 33.05 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 41.96 | 32.88 |
| GSMUA_Achr5P18140_001 | Banana | nucleus | 42.66 | 32.62 |
| TraesCS1D01G194200.2 | Wheat | cytosol, nucleus, plastid | 41.61 | 32.43 |
| GSMUA_Achr11P... | Banana | nucleus | 42.66 | 30.81 |
| CDY46459 | Canola | nucleus | 29.02 | 27.3 |
| CDX86970 | Canola | nucleus | 28.32 | 25.63 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 29.37 | 24.78 |
| CDY43785 | Canola | nucleus | 29.37 | 24.42 |
| CDX88803 | Canola | cytosol | 28.67 | 24.33 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 28.67 | 24.26 |
| CDX70995 | Canola | cytosol | 28.32 | 24.25 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 29.02 | 24.06 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 28.67 | 23.91 |
| CDX92368 | Canola | cytosol | 27.97 | 23.88 |
| CDY04487 | Canola | cytosol | 28.67 | 23.77 |
| CDX84485 | Canola | nucleus | 28.67 | 23.7 |
| CDY09128 | Canola | cytosol | 28.32 | 23.62 |
| CDY44793 | Canola | nucleus | 27.97 | 22.86 |
| CDX81124 | Canola | nucleus | 27.27 | 22.81 |
| CDY43143 | Canola | nucleus | 36.36 | 21.76 |
| CDY28745 | Canola | cytosol | 36.01 | 21.55 |
| CDY49932 | Canola | nucleus | 35.66 | 21.29 |
| CDX70745 | Canola | cytosol | 36.71 | 21.26 |
| CDX78734 | Canola | cytosol | 36.36 | 21.22 |
| CDY16943 | Canola | nucleus | 36.71 | 21.13 |
| CDY41352 | Canola | nucleus | 30.42 | 20.67 |
| CDY00676 | Canola | nucleus | 30.77 | 20.56 |
| TraesCSU01G163300.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.67 | 20.05 |
| TraesCSU01G168500.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.67 | 20.05 |
| TraesCSU01G215800.1 | Wheat | cytoskeleton, nucleus, peroxisome | 28.67 | 20.05 |
| CDY41353 | Canola | nucleus | 30.42 | 19.73 |
| CDY00946 | Canola | nucleus | 30.77 | 19.51 |
| CDY08601 | Canola | nucleus, plastid | 30.77 | 19.34 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 30.77 | 19.3 |
| CDX88115 | Canola | cytosol | 29.37 | 18.96 |
| CDX73920 | Canola | nucleus | 29.37 | 18.79 |
| CDY60870 | Canola | nucleus | 37.76 | 18.72 |
| CDY34716 | Canola | nucleus | 19.23 | 18.71 |
| CDY00677 | Canola | nucleus | 29.02 | 18.65 |
| CDY19828 | Canola | nucleus | 29.02 | 18.65 |
| CDY16427 | Canola | nucleus | 38.46 | 18.49 |
| CDX80455 | Canola | nucleus | 29.37 | 18.42 |
| CDY05939 | Canola | nucleus | 29.72 | 18.36 |
| CDY08139 | Canola | nucleus | 29.72 | 18.32 |
| CDY00208 | Canola | nucleus | 27.27 | 18.06 |
| CDX69911 | Canola | nucleus | 27.62 | 18.04 |
| CDY21575 | Canola | nucleus | 27.27 | 17.97 |
| CDX78356 | Canola | nucleus | 22.38 | 17.63 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 31.82 | 17.53 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 31.12 | 17.25 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 32.87 | 16.91 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 32.87 | 16.61 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 32.17 | 16.61 |
| CDX93723 | Canola | nucleus | 31.82 | 16.37 |
| CDY25752 | Canola | nucleus | 29.02 | 16.31 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 31.82 | 16.25 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 30.42 | 16.2 |
| CDX73305 | Canola | nucleus | 29.02 | 15.93 |
| CDY70628 | Canola | golgi | 22.03 | 15.91 |
| CDX91785 | Canola | nucleus | 29.72 | 15.77 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 30.77 | 15.63 |
| CDY21216 | Canola | nucleus | 23.43 | 15.58 |
| CDY12515 | Canola | plastid | 29.02 | 15.23 |
| CDY28397 | Canola | nucleus | 30.77 | 15.22 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 29.02 | 15.2 |
| CDX73304 | Canola | nucleus | 30.77 | 15.09 |
| CDY66161 | Canola | nucleus | 31.12 | 14.02 |
| CDY26922 | Canola | nucleus | 31.12 | 13.99 |
| CDX87118 | Canola | nucleus | 29.02 | 9.98 |
| CDX69392 | Canola | nucleus | 12.59 | 8.41 |
| CDX86969 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078JLA5 | UniProt:A0A078JLA5 | ProteinID:CDY66060.1 | EnsemblPlants:CDY67205 |
| ProteinID:CDY67205 | ProteinID:CDY67205.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00059754001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF51 | SUPFAM:SSF101941 | UniParc:UPI0004EDB9D9 | SEG:seg | : |
Description
BnaA08g29850DBnaA08g29850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLA5]
Coordinates
chrLK035860:-:5427..6550
Molecular Weight (calculated)
33013.6 Da
IEP (calculated)
5.926
GRAVY (calculated)
-0.648
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSYLPPGF RFHPTDEELV GYYLHRRNEG LEIELEIIPL MDLYKFDPWE LPEKSFLPNR DMEWFFFCHR DRKYQNGSRI NRATKSGYWK ATGKDRKIVC
101: QSSSSSSTSS IIGCRKTLVF YLGRAPFGGR TEWAMHEYRR FDNDTSQGSL NFKGDFALCR VVKRNHEVTL KKCETSSLEV PVPDEPLTNN VDIPCEARYI
201: GKGSCDASNT LRASPDFILG SSTKGHSQSQ TEDDSGFQQF SLPEIGYPPE FFADLNFDWG MENPFPFVQY QEAHVNNEVI NYDVLR
101: QSSSSSSTSS IIGCRKTLVF YLGRAPFGGR TEWAMHEYRR FDNDTSQGSL NFKGDFALCR VVKRNHEVTL KKCETSSLEV PVPDEPLTNN VDIPCEARYI
201: GKGSCDASNT LRASPDFILG SSTKGHSQSQ TEDDSGFQQF SLPEIGYPPE FFADLNFDWG MENPFPFVQY QEAHVNNEVI NYDVLR
001: MVGSFLPPGF RFYPTDEELV GYYLHRRNEG LEIELEIIPL MDLYKFDPWE LPEKSFLPNR DMEWFFFCHR DRKYQNGSRI NRATKSGYWK ATGKDRKIVC
101: HSSSSSSSSS ITGCRKTLVF YMGRAPFGGR TEWVMHEYRL FDNDTSQGSL NFKGDFALCR VIKRNEHTLK KCEIISPEVS DESLSNNVNN FCQASDLEKG
201: SCDASNTRLS SPDFILESSF QGNSHSKTEE DSGFQVFTLP EFEYPLEVFA DLNFDLEMED PFMFDYHPEP HMNNEVMSHH IRG
101: HSSSSSSSSS ITGCRKTLVF YMGRAPFGGR TEWVMHEYRL FDNDTSQGSL NFKGDFALCR VIKRNEHTLK KCEIISPEVS DESLSNNVNN FCQASDLEKG
201: SCDASNTRLS SPDFILESSF QGNSHSKTEE DSGFQVFTLP EFEYPLEVFA DLNFDLEMED PFMFDYHPEP HMNNEVMSHH IRG
Arabidopsis Description
ANAC011NAC011 [Source:UniProtKB/TrEMBL;Acc:A0A178WL27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.