Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028039.1-P | Field mustard | nucleus | 96.04 | 96.04 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 92.27 | 91.12 |
| CDX91785 | Canola | nucleus | 78.42 | 80.89 |
| CDY46459 | Canola | nucleus | 42.27 | 77.3 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 73.56 | 74.91 |
| CDX73305 | Canola | nucleus | 68.88 | 73.51 |
| CDY28397 | Canola | nucleus | 67.81 | 65.22 |
| CDX73304 | Canola | nucleus | 67.45 | 64.32 |
| CDY70627 | Canola | cytosol | 16.01 | 53.94 |
| CDY41351 | Canola | plastid | 14.21 | 47.31 |
| VIT_18s0001g01820.t01 | Wine grape | nucleus | 44.6 | 43.36 |
| CDY71253 | Canola | cytosol | 13.67 | 42.7 |
| CDX95832 | Canola | nucleus | 16.37 | 40.27 |
| CDX92153 | Canola | nucleus | 16.19 | 39.82 |
| CDY25752 | Canola | nucleus | 36.15 | 39.49 |
| Solyc04g072220.2.1 | Tomato | cytosol, nucleus, plastid | 41.73 | 38.73 |
| PGSC0003DMT400043681 | Potato | nucleus | 40.65 | 38.57 |
| Solyc12g056790.1.1 | Tomato | nucleus | 40.83 | 38.47 |
| CDY12515 | Canola | plastid | 36.51 | 37.25 |
| CDX77674 | Canola | nucleus | 17.09 | 33.45 |
| CDX90431 | Canola | nucleus | 17.09 | 33.22 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.99 | 33.22 |
| CDY63046 | Canola | nucleus | 17.27 | 33.1 |
| CDY01508 | Canola | nucleus | 16.91 | 32.87 |
| CDY10502 | Canola | nucleus | 17.99 | 32.57 |
| CDY44498 | Canola | nucleus | 16.91 | 32.19 |
| CDY59580 | Canola | nucleus | 16.91 | 31.97 |
| GSMUA_Achr8P24280_001 | Banana | nucleus | 33.63 | 31.86 |
| CDX78816 | Canola | nucleus | 16.73 | 31.85 |
| CDY66060 | Canola | nucleus | 16.37 | 31.82 |
| CDY67205 | Canola | nucleus | 16.37 | 31.82 |
| CDX87703 | Canola | nucleus | 16.73 | 31.63 |
| CDX67739 | Canola | nucleus | 17.63 | 31.51 |
| CDY42413 | Canola | nucleus | 17.45 | 31.39 |
| CDX84070 | Canola | nucleus | 15.83 | 31.1 |
| CDX81124 | Canola | nucleus | 18.35 | 29.82 |
| CDY44793 | Canola | nucleus | 18.53 | 29.43 |
| CDX86970 | Canola | nucleus | 16.55 | 29.11 |
| CDX84485 | Canola | nucleus | 17.63 | 28.32 |
| CDY43785 | Canola | nucleus | 17.45 | 28.2 |
| CDY41352 | Canola | nucleus | 19.96 | 26.37 |
| PGSC0003DMT400079995 | Potato | nucleus | 42.63 | 26.3 |
| CDY00676 | Canola | nucleus | 19.96 | 25.93 |
| CDY41353 | Canola | nucleus | 20.14 | 25.4 |
| CDX88803 | Canola | cytosol | 15.29 | 25.22 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 15.65 | 25.22 |
| CDX70995 | Canola | cytosol | 15.11 | 25.15 |
| Os09t0493700-01 | Rice | nucleus | 31.65 | 25.07 |
| CDY04487 | Canola | cytosol | 15.47 | 24.93 |
| TraesCS5D01G279100.2 | Wheat | nucleus, peroxisome, plastid | 30.58 | 24.89 |
| CDY08601 | Canola | nucleus, plastid | 20.32 | 24.84 |
| CDY00946 | Canola | nucleus | 20.14 | 24.83 |
| CDY00677 | Canola | nucleus | 19.78 | 24.72 |
| CDX73920 | Canola | nucleus | 19.78 | 24.61 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 20.14 | 24.56 |
| TraesCS5A01G271500.2 | Wheat | nucleus | 32.19 | 24.52 |
| KXG35937 | Sorghum | nucleus | 31.12 | 24.4 |
| CDX78356 | Canola | nucleus | 15.83 | 24.24 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 14.93 | 24.2 |
| CDY09128 | Canola | cytosol | 14.93 | 24.2 |
| CDY21575 | Canola | nucleus | 18.88 | 24.19 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 14.75 | 24.19 |
| CDX92368 | Canola | cytosol | 14.57 | 24.18 |
| HORVU5Hr1G074230.30 | Barley | nucleus, plastid | 32.91 | 24.14 |
| CDY28745 | Canola | cytosol | 20.68 | 24.06 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 23.2 | 24.02 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 14.57 | 23.96 |
| CDY16943 | Canola | nucleus | 21.4 | 23.94 |
| CDY43143 | Canola | nucleus | 20.5 | 23.85 |
| CDX69911 | Canola | nucleus | 18.7 | 23.74 |
| CDY49932 | Canola | nucleus | 20.32 | 23.59 |
| CDX78734 | Canola | cytosol | 20.68 | 23.47 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 23.2 | 23.2 |
| CDY00208 | Canola | nucleus | 17.99 | 23.15 |
| CDX70745 | Canola | cytosol | 20.5 | 23.08 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 22.66 | 22.74 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 23.02 | 22.61 |
| CDX88115 | Canola | cytosol | 17.99 | 22.57 |
| CDY19828 | Canola | nucleus | 17.99 | 22.47 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 22.48 | 22.32 |
| CDX80455 | Canola | nucleus | 17.99 | 21.93 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.32 | 21.9 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.32 | 21.77 |
| CDY70628 | Canola | golgi | 15.47 | 21.72 |
| CDY05939 | Canola | nucleus | 17.99 | 21.6 |
| CDY08139 | Canola | nucleus | 17.27 | 20.69 |
| CDY60870 | Canola | nucleus | 21.4 | 20.62 |
| CDY34716 | Canola | nucleus | 10.61 | 20.07 |
| CDY16427 | Canola | nucleus | 21.22 | 19.83 |
| CDY21216 | Canola | nucleus | 14.93 | 19.3 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 19.24 | 18.23 |
| CDY26922 | Canola | nucleus | 20.5 | 17.92 |
| CDY66161 | Canola | nucleus | 20.14 | 17.64 |
| CDX69392 | Canola | nucleus | 9.17 | 11.92 |
| CDX87118 | Canola | nucleus | 17.81 | 11.9 |
| CDX86969 | Canola | cytosol | 1.62 | 8.41 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078E2K7 | EnsemblPlants:CDX93723 | ProteinID:CDX93723 | ProteinID:CDX93723.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00156429001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF27 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EDFD99 | : | : |
Description
BnaA09g23230D
Coordinates
chrLK031877:-:124926..127621
Molecular Weight (calculated)
61792.0 Da
IEP (calculated)
4.413
GRAVY (calculated)
-0.470
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSWLKGGK LSAPGFRFHP TDEELVMYYL KRKICKRRLR VSAIGVVDVY KLDPEELPGQ SVLKSGDRQW FFFTPRNRKY PNAARSGRCT ATGYWKATGK
101: DRVIVYDSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EQELGRCNNA KEYYALYKLF KKSGAGPKNG EDYGAPFQEE EWVDDVNEVG DSNIPVNEEP
201: VTRRVDNATL FNPVNVQLDD VQEILNGIPY APGVPQTCIS GLASSIPQVN SQEEELPSTL VNNSSAEFLP YNMPSTFEST EVTSVPNDSG MGPFVFEQED
301: YIEMDDLLTS ELGASSTEKP EQFLDPGEFR EFNEFDQLFH DVSMFLDMEP ILQGTSADPS SLSNFANTSD QEDQSLYQQF QDQTPENKLN NIMDPNPNLS
401: QFTDNLWFQD DYQAVLFDQP QSIISGAFAL PSSGVDVMPG STNLTTSVTA QDQEGENGGG GTSPFSSALW AFMDSIPSTP ASACEGPINR TFVRMSSFSR
501: VRFGGKANGT PATTTVGLKK RSRNRGFLVL SIVGALCAIF WVFIATVRAS GRPVFS
101: DRVIVYDSRS VGLKKTLVFY RGRAPNGERT DWVMHEYTMD EQELGRCNNA KEYYALYKLF KKSGAGPKNG EDYGAPFQEE EWVDDVNEVG DSNIPVNEEP
201: VTRRVDNATL FNPVNVQLDD VQEILNGIPY APGVPQTCIS GLASSIPQVN SQEEELPSTL VNNSSAEFLP YNMPSTFEST EVTSVPNDSG MGPFVFEQED
301: YIEMDDLLTS ELGASSTEKP EQFLDPGEFR EFNEFDQLFH DVSMFLDMEP ILQGTSADPS SLSNFANTSD QEDQSLYQQF QDQTPENKLN NIMDPNPNLS
401: QFTDNLWFQD DYQAVLFDQP QSIISGAFAL PSSGVDVMPG STNLTTSVTA QDQEGENGGG GTSPFSSALW AFMDSIPSTP ASACEGPINR TFVRMSSFSR
501: VRFGGKANGT PATTTVGLKK RSRNRGFLVL SIVGALCAIF WVFIATVRAS GRPVFS
001: MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
101: ATGKDRVIEY NSRSVGLKKT LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP FQEEEWVDDD NEDVNAIAVA
201: VPEQPVVRYE DARRVDERRL FNPVILQLED IDELLNGIPN APGVPQRCIP QVNSEEELQS TLVNNSAREF LPNGQQYNRP SSFDSLETAE VTSAPLVFEK
301: EDFIEMDDLL LIPEFGASST EKAAQFSNHG EFDDFNEFDQ LFHDVSMSLD MEPIDQGTSA NLSSLSDSAN YTSDQKQQLL YQQFQDQTPE NQLNNIMDPS
401: TTLNQITSDI WFEDDQAILF DQQQSFSGAF ASPSSGVMPD STNPTMSVNA QGHEIQNGGG TTSQFSSALW ALMDSIPSTP ASACEGPLNR TFVRMSSFSR
501: MRFNGKANGT PVSTTIAKKG IRNRGFLLLS IVGALCAIFW VLVATVRVSG RSLLLKD
Arabidopsis Description
NAC017NAC017 [Source:UniProtKB/TrEMBL;Acc:A0A178WNW4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.