Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08601 | Canola | nucleus, plastid | 98.89 | 98.02 |
| Bra029844.1-P | Field mustard | nucleus, plastid | 98.45 | 97.58 |
| CDY41351 | Canola | plastid | 33.7 | 91.02 |
| CDY41352 | Canola | nucleus | 81.15 | 86.94 |
| CDY41353 | Canola | nucleus | 84.92 | 86.85 |
| AT3G10490.2 | Thale cress | nucleus | 84.26 | 84.26 |
| CDY00676 | Canola | nucleus | 78.05 | 82.24 |
| CDY70628 | Canola | golgi | 72.06 | 82.07 |
| CDY00677 | Canola | nucleus | 78.05 | 79.1 |
| CDX73920 | Canola | nucleus | 77.38 | 78.08 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 77.38 | 76.54 |
| AT3G10480.3 | Thale cress | plastid | 84.04 | 72.05 |
| CDY70627 | Canola | cytosol | 23.5 | 64.24 |
| CDY71253 | Canola | cytosol | 19.73 | 50.0 |
| KRG92124 | Soybean | nucleus | 48.78 | 47.31 |
| Solyc05g055480.2.1 | Tomato | nucleus | 39.91 | 46.63 |
| KRH34660 | Soybean | plastid | 47.89 | 46.45 |
| PGSC0003DMT400060087 | Potato | nucleus | 40.13 | 46.29 |
| PGSC0003DMT400079791 | Potato | nucleus | 40.13 | 45.25 |
| CDX92153 | Canola | nucleus | 20.84 | 41.59 |
| CDX95832 | Canola | nucleus | 20.84 | 41.59 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 39.91 | 38.71 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 36.59 | 38.19 |
| CDY10502 | Canola | nucleus | 23.28 | 34.2 |
| CDX77674 | Canola | nucleus | 21.51 | 34.15 |
| CDX67739 | Canola | nucleus | 23.5 | 34.08 |
| CDY42413 | Canola | nucleus | 23.06 | 33.66 |
| CDY63046 | Canola | nucleus | 21.29 | 33.1 |
| CDY46459 | Canola | nucleus | 21.95 | 32.57 |
| CDY59580 | Canola | nucleus | 21.06 | 32.31 |
| CDX90431 | Canola | nucleus | 20.4 | 32.17 |
| CDY01508 | Canola | nucleus | 20.4 | 32.17 |
| CDX87703 | Canola | nucleus | 20.84 | 31.97 |
| CDX81124 | Canola | nucleus | 23.95 | 31.58 |
| CDY44498 | Canola | nucleus | 20.4 | 31.51 |
| CDX78816 | Canola | nucleus | 20.18 | 31.16 |
| CDY43785 | Canola | nucleus | 23.73 | 31.1 |
| CDX84070 | Canola | nucleus | 19.51 | 31.1 |
| CDX84485 | Canola | nucleus | 23.73 | 30.92 |
| CDY66060 | Canola | nucleus | 19.51 | 30.77 |
| CDY67205 | Canola | nucleus | 19.51 | 30.77 |
| CDY44793 | Canola | nucleus | 23.73 | 30.57 |
| CDX86970 | Canola | nucleus | 19.96 | 28.48 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 30.6 | 26.74 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 30.6 | 26.59 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 31.93 | 25.99 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 31.93 | 25.9 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 31.93 | 25.71 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 30.6 | 25.7 |
| CDX92368 | Canola | cytosol | 19.07 | 25.67 |
| CDY21575 | Canola | nucleus | 24.61 | 25.58 |
| CDX69911 | Canola | nucleus | 24.39 | 25.11 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 31.49 | 25.09 |
| CDY09128 | Canola | cytosol | 19.07 | 25.07 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 19.07 | 25.07 |
| CDX70995 | Canola | cytosol | 18.4 | 24.85 |
| CDX78356 | Canola | nucleus | 19.96 | 24.79 |
| CDY04487 | Canola | cytosol | 18.85 | 24.64 |
| CDX88803 | Canola | cytosol | 18.4 | 24.63 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 18.63 | 24.35 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 17.96 | 23.89 |
| CDY28745 | Canola | cytosol | 25.06 | 23.64 |
| CDY43143 | Canola | nucleus | 25.06 | 23.64 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 17.29 | 23.08 |
| CDX78734 | Canola | cytosol | 24.83 | 22.86 |
| CDY49932 | Canola | nucleus | 23.95 | 22.55 |
| CDX70745 | Canola | cytosol | 24.39 | 22.27 |
| CDY25752 | Canola | nucleus | 25.06 | 22.2 |
| CDY16943 | Canola | nucleus | 24.39 | 22.13 |
| CDY00208 | Canola | nucleus | 21.06 | 21.99 |
| CDX73305 | Canola | nucleus | 25.06 | 21.69 |
| Os02t0822400-01 | Rice | nucleus | 29.71 | 21.2 |
| Zm00001d049913_P001 | Maize | plastid | 29.93 | 21.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.17 | 20.92 |
| CDY05939 | Canola | nucleus | 21.29 | 20.73 |
| Os08t0562200-02 | Rice | nucleus | 30.16 | 20.73 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 29.49 | 20.72 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 25.06 | 20.7 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 29.49 | 20.68 |
| TraesCS7D01G283800.1 | Wheat | nucleus | 29.49 | 20.59 |
| CDY12515 | Canola | plastid | 24.83 | 20.55 |
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 29.27 | 20.5 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 29.05 | 20.44 |
| HORVU7Hr1G060310.1 | Barley | nucleus | 29.27 | 20.43 |
| CDY19828 | Canola | nucleus | 19.96 | 20.22 |
| Zm00001d031898_P001 | Maize | plastid | 29.93 | 20.21 |
| CDX93723 | Canola | nucleus | 24.83 | 20.14 |
| CDY08139 | Canola | nucleus | 20.62 | 20.04 |
| OQU80699 | Sorghum | plastid | 29.71 | 20.0 |
| EES06041 | Sorghum | nucleus | 28.6 | 19.79 |
| CDX91785 | Canola | nucleus | 23.5 | 19.67 |
| CDY28397 | Canola | nucleus | 25.06 | 19.55 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 24.39 | 19.54 |
| Zm00001d051879_P001 | Maize | nucleus | 28.38 | 19.48 |
| CDX88115 | Canola | cytosol | 19.07 | 19.41 |
| CDX80455 | Canola | nucleus | 19.29 | 19.08 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 25.06 | 19.06 |
| CDX73304 | Canola | nucleus | 24.61 | 19.04 |
| CDY34716 | Canola | nucleus | 12.2 | 18.71 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 24.83 | 18.67 |
| TraesCSU01G135000.1 | Wheat | nucleus | 29.27 | 18.62 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 26.16 | 18.41 |
| CDY60870 | Canola | nucleus | 23.28 | 18.2 |
| CDY21216 | Canola | nucleus | 16.85 | 17.67 |
| CDY16427 | Canola | nucleus | 23.28 | 17.65 |
| TraesCS6B01G451300.1 | Wheat | nucleus | 23.28 | 16.38 |
| CDY26922 | Canola | nucleus | 22.39 | 15.88 |
| CDY66161 | Canola | nucleus | 22.17 | 15.75 |
| CDX69392 | Canola | nucleus | 10.64 | 11.21 |
| CDX87118 | Canola | nucleus | 20.62 | 11.18 |
| CDX86969 | Canola | cytosol | 1.33 | 5.61 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078EIH7 | EnsemblPlants:CDY00946 | ProteinID:CDY00946 | ProteinID:CDY00946.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00110954001 | InterPro:IPR003441 |
| InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 |
| PANTHER:PTHR31989:SF29 | SUPFAM:SSF101941 | UniParc:UPI0004EB52BC | SEG:seg | : | : |
Description
BnaC05g42540D
Coordinates
chrLK031923:+:254583..257645
Molecular Weight (calculated)
50809.7 Da
IEP (calculated)
6.005
GRAVY (calculated)
-0.752
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRESVAVVS SPPTATARGT ATVAATSLAP GFRFHPTDEE LVSYYLKRKV MGKPVRFDAI GDVDIYKHEP WDLAVFSRLK TRDQEWYFYS ALDKKYGNGA
101: RMNRATNKGY WKATGKDREI RRDIQLLGMK KTLVFHSGRA PDGLRTNWVM HEYRLVDYET ESNGNLVQDA YVLCRVFHKN NIGPPSGNRY APFLEEEWAD
201: EGVALIPGVD VRVRAEPLPF ANGNNQMDQP ASKDLININE PPRETTPMDI EVSHQNHHEN APKPQENNNN NHYDEAEEAL KLEQAEEDER PPPACVLNKE
301: APLPLLQYKR RRQNEPNNNS SRTTQDHCSS TITTVDNTPI TLISSSAAAA TNTAISALLE FSLMGISAKK ENTPQPPNKE AYPPAPLPSI EEKLNDLQKE
401: VHQMSVERET FKLEMMSAEA MISILQSRID ALRQENDELR KNNATKGQAV L
101: RMNRATNKGY WKATGKDREI RRDIQLLGMK KTLVFHSGRA PDGLRTNWVM HEYRLVDYET ESNGNLVQDA YVLCRVFHKN NIGPPSGNRY APFLEEEWAD
201: EGVALIPGVD VRVRAEPLPF ANGNNQMDQP ASKDLININE PPRETTPMDI EVSHQNHHEN APKPQENNNN NHYDEAEEAL KLEQAEEDER PPPACVLNKE
301: APLPLLQYKR RRQNEPNNNS SRTTQDHCSS TITTVDNTPI TLISSSAAAA TNTAISALLE FSLMGISAKK ENTPQPPNKE AYPPAPLPSI EEKLNDLQKE
401: VHQMSVERET FKLEMMSAEA MISILQSRID ALRQENDELR KNNATKGQAV L
001: MGRESLAVVS SPPSATAPST AVSATSLAPG FRFHPTDEEL VSYYLKRKVL GKPVRFDAIG EVDIYKHEPW DLAVFSKLKT RDQEWYFFSA LDKKYGNGAR
101: MNRATNKGYW KATGKDREIR RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE TNGSLLQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADG
201: GGALIPGIDV RVRVEALPQA NGNNQMDQEM HSASKDLINI NELPRDATPM DIEPNQQNHH ESAFKPQESN NHSGYEEDED TLKREHAEED ERPPSLCILN
301: KEAPLPLLQY KRRRQNESNN NSSRNTQDHC SSTITTVDNT TTLISSSAAA ATNTAISALL EFSLMGISDK KENQQKEETS PPSPIASPEE KVNDLQKEVH
401: QMSVERETFK LEMMSAEAMI SILQSRIDAL RQENEELKKK NASGQAS
101: MNRATNKGYW KATGKDREIR RDIQLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE TNGSLLQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADG
201: GGALIPGIDV RVRVEALPQA NGNNQMDQEM HSASKDLINI NELPRDATPM DIEPNQQNHH ESAFKPQESN NHSGYEEDED TLKREHAEED ERPPSLCILN
301: KEAPLPLLQY KRRRQNESNN NSSRNTQDHC SSTITTVDNT TTLISSSAAA ATNTAISALL EFSLMGISDK KENQQKEETS PPSPIASPEE KVNDLQKEVH
401: QMSVERETFK LEMMSAEAMI SILQSRIDAL RQENEELKKK NASGQAS
Arabidopsis Description
ANAC050NAC domain containing protein 50 [Source:UniProtKB/TrEMBL;Acc:F4J3S6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.