Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G406700.1 | Wheat | cytosol, golgi, nucleus | 88.14 | 87.73 |
| TraesCS6D01G390200.1 | Wheat | cytosol, nucleus, peroxisome | 87.52 | 87.38 |
| HORVU6Hr1G093050.4 | Barley | cytosol, golgi, nucleus | 82.84 | 82.84 |
| KRH34662 | Soybean | cytosol | 8.89 | 62.64 |
| Os02t0822400-01 | Rice | nucleus | 58.66 | 59.49 |
| EES06041 | Sorghum | nucleus | 57.72 | 56.75 |
| Zm00001d051879_P001 | Maize | nucleus | 54.91 | 53.58 |
| CDY70627 | Canola | cytosol | 10.45 | 40.61 |
| CDY41351 | Canola | plastid | 10.3 | 39.52 |
| PGSC0003DMT400060090 | Potato | nucleus | 25.12 | 30.09 |
| VIT_13s0019g05240.t01 | Wine grape | cytosol, nucleus, plastid | 26.21 | 30.05 |
| PGSC0003DMT400079791 | Potato | nucleus | 18.72 | 30.0 |
| TraesCS5B01G356100.1 | Wheat | nucleus | 10.14 | 29.95 |
| Solyc05g055470.2.1 | Tomato | nucleus | 24.96 | 29.41 |
| Solyc11g008000.1.1 | Tomato | nucleus | 23.56 | 28.6 |
| PGSC0003DMT400079789 | Potato | cytosol, nucleus, plastid | 23.71 | 27.99 |
| Solyc05g055480.2.1 | Tomato | nucleus | 16.85 | 27.98 |
| PGSC0003DMT400060087 | Potato | nucleus | 16.85 | 27.62 |
| TraesCS5B01G356000.1 | Wheat | nucleus | 11.08 | 27.41 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 23.71 | 27.34 |
| AT3G10500.1 | Thale cress | cytosol, nucleus, vacuole | 23.4 | 27.32 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 23.56 | 26.68 |
| Bra005804.1-P | Field mustard | cytosol, nucleus, vacuole | 23.56 | 26.63 |
| AT5G04410.1 | Thale cress | cytosol, nucleus, plastid | 23.56 | 26.63 |
| Bra034120.1-P | Field mustard | cytosol, nucleus, plastid | 22.15 | 26.44 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 23.09 | 26.43 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 22.78 | 26.35 |
| Bra009456.1-P | Field mustard | cytosol, nucleus, plastid | 22.78 | 26.35 |
| Bra034118.1-P | Field mustard | nucleus | 17.16 | 26.13 |
| TraesCS7B01G196900.1 | Wheat | nucleus | 26.21 | 26.13 |
| CDY41352 | Canola | nucleus | 17.0 | 25.89 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 21.68 | 25.88 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 20.75 | 25.78 |
| CDY00676 | Canola | nucleus | 17.16 | 25.7 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 20.75 | 25.63 |
| Bra028790.1-P | Field mustard | cytosol, nucleus, plastid | 20.12 | 25.6 |
| Solyc11g008010.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 18.41 | 25.38 |
| Bra001365.1-P | Field mustard | nucleus | 17.0 | 25.29 |
| CDY41353 | Canola | nucleus | 17.0 | 24.72 |
| Bra034119.1-P | Field mustard | nucleus | 16.85 | 24.55 |
| VIT_13s0019g05230.t01 | Wine grape | nucleus | 16.38 | 24.31 |
| AT3G10490.2 | Thale cress | nucleus | 17.0 | 24.17 |
| GSMUA_Achr9P23580_001 | Banana | plastid | 22.31 | 24.11 |
| Bra001366.1-P | Field mustard | nucleus | 15.76 | 23.99 |
| TraesCS1B01G277300.1 | Wheat | nucleus | 16.07 | 23.84 |
| TraesCS6B01G033000.1 | Wheat | nucleus | 13.42 | 23.56 |
| KRG92121 | Soybean | cytosol | 22.0 | 23.34 |
| Bra029844.1-P | Field mustard | nucleus, plastid | 16.54 | 23.3 |
| CDY00946 | Canola | nucleus | 16.38 | 23.28 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 16.54 | 23.25 |
| CDY08601 | Canola | nucleus, plastid | 16.38 | 23.08 |
| KRH34660 | Soybean | plastid | 16.69 | 23.01 |
| GSMUA_Achr9P20400_001 | Banana | nucleus, peroxisome, plastid | 21.53 | 23.0 |
| TraesCS2B01G616900.1 | Wheat | nucleus | 14.35 | 22.66 |
| GSMUA_Achr2P04010_001 | Banana | plastid | 22.62 | 22.62 |
| KRG92124 | Soybean | nucleus | 16.38 | 22.58 |
| CDY00677 | Canola | nucleus | 15.6 | 22.47 |
| CDX73920 | Canola | nucleus | 15.6 | 22.37 |
| AT3G10480.3 | Thale cress | plastid | 16.85 | 20.53 |
| CDY70628 | Canola | golgi | 12.48 | 20.2 |
| GSMUA_AchrUn_... | Banana | nucleus | 14.51 | 19.46 |
| TraesCS1B01G192200.1 | Wheat | cytosol, nucleus, plastid | 10.76 | 18.9 |
| TraesCS3B01G208300.2 | Wheat | cytosol | 13.57 | 18.09 |
| TraesCS4B01G350600.1 | Wheat | cytosol, nucleus, peroxisome | 15.91 | 14.76 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 12.95 | 11.84 |
| TraesCS5B01G271800.1 | Wheat | cytosol, golgi, peroxisome | 7.33 | 8.01 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF49 | SUPFAM:SSF101941 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G451300 |
| EnsemblPlants:TraesCS6B01G451300.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:710102321..710106188
Molecular Weight (calculated)
66507.3 Da
IEP (calculated)
4.138
GRAVY (calculated)
-0.528
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSPPAAA EEVPMAPGFR FHPTDEELVS YYLRRRVLGR RLRIDAIAEV DLYRLEPWDL PPLSRIRSRD AQWYFFARLD RKVAGAGAGG RGGPGNRTNR
101: ATPRGYWKTT GKDREVFHRG XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXAQDMH VVCRIFQKVG SGPQNGAQYG APYMEEEWED EDDAIENTPT
201: SGTSTEMLAI TDAASAESNV EDEHIFSGIN EFVQTPEVLI PQEIAPLQAI APLQVQDFNE TGMGSYADGD VPLNEILQEP VSDVSVDNTG EPEEQSPLDD
301: HFSLADLSGC HNQDDGYVRQ AGHTMWSDPS IGDQASYPMR TYGNRNHANR TLSDEEFFDT GNDANAYSGQ QQACPSDDQN LYSGLQQACP SDEQNLYLQP
401: NGLPFPQQLD DNAPFYETSS DHKWEVGKDG YVNVDDISLF EDDDIMALLN ASDDDFSSNL LGPVDGSNSQ LPAASNFDQK DEAKAQYAAS SSGSHENLYP
501: DTMVPDVPVD DNAGKRYFTN MLGSYPAPPA MASEFPPTTG KSIAALSGPS QIRVTAGIVQ LGDHTDNSDH WPLQKNGVFN LLLSFTVESN VSTKSITFDD
601: EPATTRVSTV PTVLRGGLYL FFVSAMILML SFKVGSCIYS R
101: ATPRGYWKTT GKDREVFHRG XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXAQDMH VVCRIFQKVG SGPQNGAQYG APYMEEEWED EDDAIENTPT
201: SGTSTEMLAI TDAASAESNV EDEHIFSGIN EFVQTPEVLI PQEIAPLQAI APLQVQDFNE TGMGSYADGD VPLNEILQEP VSDVSVDNTG EPEEQSPLDD
301: HFSLADLSGC HNQDDGYVRQ AGHTMWSDPS IGDQASYPMR TYGNRNHANR TLSDEEFFDT GNDANAYSGQ QQACPSDDQN LYSGLQQACP SDEQNLYLQP
401: NGLPFPQQLD DNAPFYETSS DHKWEVGKDG YVNVDDISLF EDDDIMALLN ASDDDFSSNL LGPVDGSNSQ LPAASNFDQK DEAKAQYAAS SSGSHENLYP
501: DTMVPDVPVD DNAGKRYFTN MLGSYPAPPA MASEFPPTTG KSIAALSGPS QIRVTAGIVQ LGDHTDNSDH WPLQKNGVFN LLLSFTVESN VSTKSITFDD
601: EPATTRVSTV PTVLRGGLYL FFVSAMILML SFKVGSCIYS R
001: MGRESVAVVT APPSATAPGT ASVATSLAPG FRFHPTDEEL VSYYLKRKVL GQPVRFDAIG EVDIYKHEPW DLAVFSRLKT RDQEWYFYSA LDKKYGNGAR
101: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD
201: EGALIPGIDV KLRLEPPPVA NGNDQMDQII YASSGVHL
101: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD
201: EGALIPGIDV KLRLEPPPVA NGNDQMDQII YASSGVHL
Arabidopsis Description
ANAC052NAC052 [Source:UniProtKB/TrEMBL;Acc:A0A178VCW1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.