Factsheet for Bra009456.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70227	Canola	cytosol, nucleus, vacuole	99.28	99.28
CDY44853	Canola	cytosol, nucleus, vacuole	94.22	93.21
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	75.63	83.13
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	83.39	81.48
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	81.41	79.54
KRH34662	Soybean	cytosol	10.47	63.74
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	61.01	62.94
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	47.47	47.05
Solyc05g055470.2.1	Tomato	nucleus	44.22	45.04
PGSC0003DMT400060090	Potato	nucleus	42.6	44.11
Solyc11g008000.1.1	Tomato	nucleus	41.7	43.75
PGSC0003DMT400079789	Potato	cytosol, nucleus, plastid	42.42	43.28
Bra022236.1-P	Field mustard	nucleus	18.41	41.63
Bra025012.1-P	Field mustard	nucleus	18.59	35.52
Bra024263.1-P	Field mustard	nucleus	21.84	35.17
Bra030807.1-P	Field mustard	nucleus	19.31	34.63
Bra003335.1-P	Field mustard	nucleus	18.59	34.22
Bra034119.1-P	Field mustard	nucleus	27.08	34.09
Bra012626.1-P	Field mustard	nucleus	17.51	33.92
Bra022046.1-P	Field mustard	nucleus	17.87	33.67
Bra034118.1-P	Field mustard	nucleus	25.45	33.49
KRG92121	Soybean	cytosol	35.92	32.95
Bra001365.1-P	Field mustard	nucleus	25.63	32.95
Bra013272.1-P	Field mustard	nucleus	17.33	32.88
Bra035488.1-P	Field mustard	nucleus	16.79	32.52
Bra029844.1-P	Field mustard	nucleus, plastid	26.17	31.87
Bra028640.1-P	Field mustard	nucleus	22.92	31.83
Bra001366.1-P	Field mustard	nucleus	24.01	31.59
Bra006019.1-P	Field mustard	nucleus	19.86	30.3
Bra009379.1-P	Field mustard	nucleus	23.65	28.85
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	31.95	27.57
TraesCS6A01G406700.1	Wheat	cytosol, golgi, nucleus	31.77	27.33
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	31.59	27.3
Os08t0562200-02	Rice	nucleus	32.13	27.13
TraesCS7B01G196900.1	Wheat	nucleus	31.41	27.06
EES06041	Sorghum	nucleus	31.77	26.99
TraesCS7D01G283800.1	Wheat	nucleus	31.41	26.93
Zm00001d049913_P001	Maize	plastid	30.87	26.8
Os02t0822400-01	Rice	nucleus	30.51	26.74
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	16.61	26.67
HORVU7Hr1G060310.1	Barley	nucleus	31.05	26.63
GSMUA_AchrUn_...	Banana	nucleus	22.92	26.57
OQU80699	Sorghum	plastid	32.13	26.57
Bra006619.1-P	Field mustard	cytosol	16.07	26.41
Bra020182.1-P	Field mustard	cytosol	16.25	26.24
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	15.88	26.04
Zm00001d031898_P001	Maize	plastid	31.23	25.9
Bra002403.1-P	Field mustard	cytosol	14.98	25.62
Zm00001d051879_P001	Maize	nucleus	30.32	25.57
Bra012342.1-P	Field mustard	nucleus	23.1	25.15
Bra032009.1-P	Field mustard	nucleus	21.66	25.1
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	27.08	25.0
TraesCSU01G135000.1	Wheat	nucleus	31.95	24.96
GSMUA_Achr9P23580_001	Banana	plastid	26.17	24.45
Bra021366.1-P	Field mustard	nucleus	21.12	24.38
Bra006392.1-P	Field mustard	cytosol	21.12	23.88
Bra019599.1-P	Field mustard	nucleus	18.41	23.61
Bra039745.1-P	Field mustard	nucleus	22.92	23.26
GSMUA_Achr2P04010_001	Banana	plastid	26.35	22.78
TraesCS6B01G451300.1	Wheat	nucleus	26.35	22.78
Bra028039.1-P	Field mustard	nucleus	22.56	22.48
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	22.02	22.34
Bra036520.1-P	Field mustard	nucleus	17.87	22.25
Bra017980.1-P	Field mustard	nucleus	18.59	22.25
Bra036744.1-P	Field mustard	nucleus	21.84	22.12
Bra034439.1-P	Field mustard	nucleus	22.56	21.63
Bra009774.1-P	Field mustard	nucleus	17.69	21.54
Bra008567.1-P	Field mustard	nucleus	17.33	21.48
Bra010193.1-P	Field mustard	nucleus	19.68	17.14

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra009456	EnsemblPlants:Bra009456.1	EnsemblPlants:Bra009456.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4CZ09	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF43	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002547964	SEG:seg	:

Description

AT5G04410 (E=3e-243) NAC2, anac078 | NAC2; transcription factor

Coordinates

chrA10:-:16723241..16725399

Molecular Weight (calculated)

62019.9 Da

IEP (calculated)

4.188

GRAVY (calculated)

-0.574

Length

554 amino acids

Sequence
(BLAST)

001: MGLGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFTFDA ISVTDIYKSE PWDLPDKSML KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRAVGM KKTLVYHKGR APRGERTNWV MHEYRLTDEE LKRAGAPLDA FVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDKMTFVPEQ DALSEGLAVD
201: DDVYVDIDEI DEKPENLVVY DAIPVQTNYC HGESSNNAES GNYEDSGNYV VDSGGYIEQP TETFEEDQKP IIRDCSIQPC SLYPVEQIGC GVEDENAVNL
301: ETSNNNVFVA DPCYSDIPIE ADYLPDEPFM DPSNNLPLCD DLYLETNDLS GGGLQDDFNF EDYLNFFDDE EAQNLTLDVS QLLGSQDAPP EQEGLDQKPS
401: PEELEKEVVE KKESGEGSSS KQDADVTDFD SDSKYPFLKK SSHMFGVPPS FASQFQTKDA AIRLHAAQSS GSVHVTAGMI RISNMTPAVD SDMGWAYDKS
501: GDLNVVLSFG LVQRDDAMSK TGGTSATRAM LIFLCLWVLL LSVSFKIVTM VSAR

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.