Factsheet for Bra003335.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005398.1-P
Bra010606.1-P
Bra011777.1-P
Bra017842.1-P
Bra018899.1-P
Bra021926.1-P
Bra025644.1-P
Bra030451.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54330.1	Bra018899.1-P	AT1G51190.1	21245844
AT1G54330.1	Bra030451.1-P	AT1G51190.1	21245844
AT1G54330.1	Bra005398.1-P	AT2G34710.1	21245844
AT1G54330.1	Bra021926.1-P	AT2G34710.1	21245844
AT1G54330.1	Bra010606.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra011777.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra017842.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra025644.1-P	AT5G39760.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67739	Canola	nucleus	99.0	95.82
CDY71253	Canola	cytosol	50.83	85.96
AT1G54330.1	Thale cress	nucleus	81.73	81.73
Bra030807.1-P	Field mustard	nucleus	81.73	79.61
VIT_19s0085g00950.t01	Wine grape	nucleus	51.49	55.16
Bra022236.1-P	Field mustard	nucleus	39.2	48.16
KRH43662	Soybean	nucleus	51.83	44.83
KRH13792	Soybean	nucleus	51.49	44.67
Bra012626.1-P	Field mustard	nucleus	35.22	37.06
Bra025012.1-P	Field mustard	nucleus	34.55	35.86
Bra022046.1-P	Field mustard	nucleus	34.55	35.37
Bra013272.1-P	Field mustard	nucleus	33.89	34.93
Bra035488.1-P	Field mustard	nucleus	32.89	34.62
Bra024263.1-P	Field mustard	nucleus	30.9	27.03
Bra006392.1-P	Field mustard	cytosol	41.53	25.51
Bra032009.1-P	Field mustard	nucleus	39.87	25.1
Bra021366.1-P	Field mustard	nucleus	39.53	24.79
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	26.25	23.37
Bra039745.1-P	Field mustard	nucleus	41.86	23.08
Bra028640.1-P	Field mustard	nucleus	30.56	23.06
Bra006619.1-P	Field mustard	cytosol	25.58	22.85
Bra002403.1-P	Field mustard	cytosol	24.58	22.84
Bra034118.1-P	Field mustard	nucleus	31.89	22.8
Bra020182.1-P	Field mustard	cytosol	25.91	22.74
Bra001366.1-P	Field mustard	nucleus	31.56	22.57
Bra008567.1-P	Field mustard	nucleus	33.22	22.37
Bra034119.1-P	Field mustard	nucleus	32.56	22.27
Bra029844.1-P	Field mustard	nucleus, plastid	33.55	22.2
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	25.25	22.03
Bra001365.1-P	Field mustard	nucleus	31.23	21.81
Bra019599.1-P	Field mustard	nucleus	31.23	21.76
Bra009774.1-P	Field mustard	nucleus	30.9	20.44
Bra036520.1-P	Field mustard	nucleus	29.9	20.22
Bra006019.1-P	Field mustard	nucleus	24.25	20.11
Bra017980.1-P	Field mustard	nucleus	30.9	20.09
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	33.55	20.04
Bra009379.1-P	Field mustard	nucleus	29.24	19.38
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	35.22	18.69
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	34.22	18.59
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	31.56	17.69
Bra036744.1-P	Field mustard	nucleus	30.56	16.82
Bra028039.1-P	Field mustard	nucleus	30.23	16.37
Bra012342.1-P	Field mustard	nucleus	27.57	16.31
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	29.24	16.12
Bra034439.1-P	Field mustard	nucleus	30.23	15.74
Bra010193.1-P	Field mustard	nucleus	31.56	14.94

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra003335	EnsemblPlants:Bra003335.1	EnsemblPlants:Bra003335.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4CGK2	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941
UniParc:UPI0002541690	SEG:seg	:	:	:	:

Description

AT1G54330 (E=6e-124) ANAC020 | ANAC020 (Arabidopsis NAC domain containing protein 20); transcription factor

Coordinates

chrA07:-:12656878..12658083

Molecular Weight (calculated)

34948.1 Da

IEP (calculated)

5.901

GRAVY (calculated)

-0.825

Length

301 amino acids

Sequence
(BLAST)

001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG RTIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRAVES
101: KKMKLGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHLPSSS PSSSIKKHIQ IPKRKDEEMM MGTSVGKEKK EEEEENMWRK CDKVMMERES DEDESFKIAS
201: AETSSSELTQ GILLDEANNS SNFPLHFSSS LLGDHDQFFA NYSHLPYYPP LQLQDFPQIS INEAQIMSTE YSKQQDFQCR DSMNGTLDEI FSFSSSATFP
301: L

Best Arabidopsis Sequence Match ( AT1G54330.1 )
(BLAST)

001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG QAIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRTVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L

Arabidopsis Description

ANAC020NAC domain containing protein 20 [Source:UniProtKB/TrEMBL;Acc:Q67Z40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.