Factsheet for Bra030807.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005398.1-P
Bra010606.1-P
Bra011777.1-P
Bra017842.1-P
Bra018899.1-P
Bra021926.1-P
Bra025644.1-P
Bra030451.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G54330.1	Bra018899.1-P	AT1G51190.1	21245844
AT1G54330.1	Bra030451.1-P	AT1G51190.1	21245844
AT1G54330.1	Bra005398.1-P	AT2G34710.1	21245844
AT1G54330.1	Bra021926.1-P	AT2G34710.1	21245844
AT1G54330.1	Bra010606.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra011777.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra017842.1-P	AT4G37650.1	21245844
AT1G54330.1	Bra025644.1-P	AT5G39760.1	21245844

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42413	Canola	nucleus	99.35	99.35
CDY10502	Canola	nucleus	93.53	94.14
AT1G54330.1	Thale cress	nucleus	83.5	85.71
Bra003335.1-P	Field mustard	nucleus	79.61	81.73
VIT_19s0085g00950.t01	Wine grape	nucleus	50.81	55.87
Bra022236.1-P	Field mustard	nucleus	40.45	51.02
KRH43662	Soybean	nucleus	51.13	45.4
KRH13792	Soybean	nucleus	50.81	45.24
Bra012626.1-P	Field mustard	nucleus	35.28	38.11
Bra025012.1-P	Field mustard	nucleus	34.3	36.55
Bra022046.1-P	Field mustard	nucleus	34.3	36.05
Bra035488.1-P	Field mustard	nucleus	33.33	36.01
Bra013272.1-P	Field mustard	nucleus	33.98	35.96
Bra006392.1-P	Field mustard	cytosol	43.37	27.35
Bra024263.1-P	Field mustard	nucleus	30.42	27.33
Bra032009.1-P	Field mustard	nucleus	41.1	26.57
Bra021366.1-P	Field mustard	nucleus	40.45	26.04
Bra039745.1-P	Field mustard	nucleus	42.72	24.18
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	25.89	23.67
Bra028640.1-P	Field mustard	nucleus	30.42	23.56
Bra034118.1-P	Field mustard	nucleus	32.04	23.52
Bra008567.1-P	Field mustard	nucleus	33.33	23.04
Bra034119.1-P	Field mustard	nucleus	32.69	22.95
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	25.57	22.9
Bra029844.1-P	Field mustard	nucleus, plastid	33.66	22.86
Bra006619.1-P	Field mustard	cytosol	24.92	22.85
Bra002403.1-P	Field mustard	cytosol	23.95	22.84
Bra020182.1-P	Field mustard	cytosol	25.24	22.74
Bra001365.1-P	Field mustard	nucleus	31.72	22.74
Bra001366.1-P	Field mustard	nucleus	30.74	22.57
Bra019599.1-P	Field mustard	nucleus	31.07	22.22
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	34.3	21.03
Bra006019.1-P	Field mustard	nucleus	24.27	20.66
Bra009774.1-P	Field mustard	nucleus	30.42	20.66
Bra036520.1-P	Field mustard	nucleus	29.45	20.45
Bra017980.1-P	Field mustard	nucleus	30.42	20.3
Bra009379.1-P	Field mustard	nucleus	28.8	19.6
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	35.6	19.4
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	34.63	19.31
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	32.04	18.44
Bra036744.1-P	Field mustard	nucleus	31.07	17.55
Bra028039.1-P	Field mustard	nucleus	30.74	17.09
Bra012342.1-P	Field mustard	nucleus	27.83	16.9
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	29.77	16.85
Bra034439.1-P	Field mustard	nucleus	29.77	15.92
Bra010193.1-P	Field mustard	nucleus	32.04	15.57

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra030807	EnsemblPlants:Bra030807.1	EnsemblPlants:Bra030807.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003441	InterPro:IPR036093	UniProt:M4EPT6	InterPro:NAC-dom
InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941
UniParc:UPI0002546CBE	SEG:seg	:	:	:	:

Description

AT1G54330 (E=2e-121) ANAC020 | ANAC020 (Arabidopsis NAC domain containing protein 20); transcription factor

Coordinates

chrA08:+:5322..6518

Molecular Weight (calculated)

35722.1 Da

IEP (calculated)

5.870

GRAVY (calculated)

-0.763

Length

309 amino acids

Sequence
(BLAST)

001: MAPMSLPPGF RFHPTDEVLV AYYLERKVNG RTIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRVVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHPTSSS SIQESYALCR VFKKNIQIPK RKEEEMTTSV GKEEEEEEKK KWKKYDGETM ERESEEVESL
201: KIASAETSSS ELTQGILLDE ANSSSIFALH FSSSLLDDHD HQLFENYPQL PFHSPLPLQG FPQLSMNEAE IISMDNSKQQ DFHYRDSING TLDEIFSFAS
301: SSATLPPAL

Best Arabidopsis Sequence Match ( AT1G54330.1 )
(BLAST)

001: MAPMSLPPGF RFHPTDEELV AYYLDRKVNG QAIELEIIPE VDLYKCEPWD LPEKSFLPGN DMEWYFYSTR DKKYPNGSRT NRATRAGYWK ATGKDRTVES
101: KKMKMGMKKT LVYYRGRAPH GLRTNWVMHE YRLTHAPSSS LKESYALCRV FKKNIQIPKR KGEEEEAEEE STSVGKEEEE EKEKKWRKCD GNYIEDESLK
201: RASAETSSSE LTQGVLLDEA NSSSIFALHF SSSLLDDHDH LFSNYSHQLP YHPPLQLQDF PQLSMNEAEI MSIQQDFQCR DSMNGTLDEI FSSSATFPAS
301: L

Arabidopsis Description

ANAC020NAC domain containing protein 20 [Source:UniProtKB/TrEMBL;Acc:Q67Z40]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.