Factsheet for Bra012024.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04487	Canola	cytosol	99.42	99.42
CDX71459	Canola	cytosol, golgi, nucleus	97.1	97.1
AT2G27300.1	Thale cress	nucleus	81.16	83.58
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	41.45	42.31
Bra020182.1-P	Field mustard	cytosol	40.29	40.52
Bra002403.1-P	Field mustard	cytosol	37.39	39.81
Bra006619.1-P	Field mustard	cytosol	37.39	38.28
Bra022236.1-P	Field mustard	nucleus	22.9	32.24
Bra012626.1-P	Field mustard	nucleus	24.35	29.37
Bra035488.1-P	Field mustard	nucleus	23.48	28.32
Bra025012.1-P	Field mustard	nucleus	23.48	27.93
Bra013272.1-P	Field mustard	nucleus	23.48	27.74
Bra022046.1-P	Field mustard	nucleus	23.19	27.21
Bra030807.1-P	Field mustard	nucleus	22.9	25.57
Bra003335.1-P	Field mustard	nucleus	22.03	25.25
Bra024263.1-P	Field mustard	nucleus	24.35	24.42
Bra017980.1-P	Field mustard	nucleus	28.99	21.6
Bra019599.1-P	Field mustard	nucleus	26.38	21.06
Bra034118.1-P	Field mustard	nucleus	25.51	20.9
Bra001365.1-P	Field mustard	nucleus	26.09	20.88
Bra036520.1-P	Field mustard	nucleus	26.67	20.67
Bra009774.1-P	Field mustard	nucleus	27.25	20.66
Bra028640.1-P	Field mustard	nucleus	23.77	20.55
Bra001366.1-P	Field mustard	nucleus	24.93	20.43
Bra034119.1-P	Field mustard	nucleus	25.22	19.77
Bra032009.1-P	Field mustard	nucleus	27.25	19.67
Bra021366.1-P	Field mustard	nucleus	27.25	19.58
Bra006019.1-P	Field mustard	nucleus	20.0	19.01
Bra006392.1-P	Field mustard	cytosol	26.96	18.98
Bra009379.1-P	Field mustard	nucleus	24.93	18.94
Bra029844.1-P	Field mustard	nucleus, plastid	24.64	18.68
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	27.83	17.88
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	25.22	17.26
Bra039745.1-P	Field mustard	nucleus	27.25	17.22
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	26.67	16.61
Bra012342.1-P	Field mustard	nucleus	24.35	16.5
Bra008567.1-P	Field mustard	nucleus	20.87	16.11
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	26.09	15.87
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	24.93	15.75
Bra028039.1-P	Field mustard	nucleus	24.64	15.29
Bra010193.1-P	Field mustard	nucleus	27.83	15.09
Bra036744.1-P	Field mustard	nucleus	23.19	14.63
Bra034439.1-P	Field mustard	nucleus	23.77	14.19

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra012024	EnsemblPlants:Bra012024.1	EnsemblPlants:Bra012024.1-P	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005886	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009653	GO:GO:0009719
GO:GO:0009739	GO:GO:0009791	GO:GO:0009845	GO:GO:0009938	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0019538	GO:GO:0030154	GO:GO:0033619	GO:GO:0043565
GO:GO:0045893	GO:GO:0048573	GO:GO:0071472	GO:GO:2000039	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4D6B5	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF40	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI00025418C2	:	:

Description

AT2G27300 (E=2e-152) ANAC040, NTL8 | NTL8 (NTM1-LIKE 8); transcription factor

Coordinates

chrA07:-:10553754..10555076

Molecular Weight (calculated)

39221.9 Da

IEP (calculated)

5.361

GRAVY (calculated)

-0.665

Length

345 amino acids

Sequence
(BLAST)

001: MSKEAEMSIA VSALFPGFRF SPTDVELISY YLRRKIEGDE NSVAVIAEVE IYKFEPWDLP GESKLKSENE WFYFCARGRK YPHGSQSRRA TELGYWKATG
101: KERSVKAGNQ IVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGASQDALVV CRLRKNADFR ASSSQRQMED GLVQDDDYVG QTGGSEREKK SYLVDEPEQL
201: QISNGDIAES SNVVEYQDDT NDDCYAEILN DDIIKLDEEA VKANQAFRTN YPTQQETIFT EASSSKQMSE CGTKKESKQT MNSYALFRIR NDSTASSSGW
301: RIPNPLTHIK KDDTQRVTKN VLATTVFLTI LMSVLFTVLT GRDRD

Best Arabidopsis Sequence Match ( AT2G27300.1 )
(BLAST)

001: MSKEAEMSIA VSALFPGFRF SPTDVELISY YLRRKIDGDE NSVAVIAEVE IYKFEPWDLP EESKLKSENE WFYFCARGRK YPHGSQSRRA TQLGYWKATG
101: KERSVKSGNQ VVGTKRTLVF HIGRAPRGER TEWIMHEYCI HGAPQDALVV CRLRKNADFR ASSTQKMEDG VVQDDGYVGQ RGGLEKEDKS YYESEHQIPN
201: GDIAESSNVV EDQADTDDDC YAEILNDDII KLDEEALKAS QAFRPTNPTH QETISSESSS KRSKCGIKKE STETMNCYAL FRIKNVAGTD SSWRFPNPFK
301: IKKDDSQRLM KNVLATTVFL AILFSFFWTV LIARN

Arabidopsis Description

NTL8NAC domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.