Factsheet for Bra021471.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34714	Canola	cytosol, golgi, nucleus	99.7	99.7
CDY34716	Canola	nucleus	81.66	93.88
AT3G44290.1	Thale cress	cytosol	84.91	85.67
Bra002403.1-P	Field mustard	cytosol	60.35	62.96
Bra020182.1-P	Field mustard	cytosol	63.61	62.68
Bra006619.1-P	Field mustard	cytosol	61.54	61.72
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	42.31	41.45
VIT_06s0080g00970.t01	Wine grape	nucleus	42.9	37.37
KRH22653	Soybean	nucleus	39.65	36.12
PGSC0003DMT400015077	Potato	nucleus	41.12	34.07
Solyc06g074170.2.1	Tomato	nucleus	40.83	33.74
PGSC0003DMT400050482	Potato	nucleus	42.31	33.26
Bra022236.1-P	Field mustard	nucleus	22.78	31.43
Solyc11g068750.1.1	Tomato	nucleus, plasma membrane	42.01	31.42
Bra025012.1-P	Field mustard	nucleus	25.74	30.0
Bra012626.1-P	Field mustard	nucleus	24.85	29.37
Bra022046.1-P	Field mustard	nucleus	25.44	29.25
Bra035488.1-P	Field mustard	nucleus	23.96	28.32
KRH26664	Soybean	nucleus	40.53	27.79
Bra013272.1-P	Field mustard	nucleus	23.37	27.05
Bra003335.1-P	Field mustard	nucleus	23.37	26.25
Bra030807.1-P	Field mustard	nucleus	23.67	25.89
Bra024263.1-P	Field mustard	nucleus	22.49	22.09
Bra028640.1-P	Field mustard	nucleus	25.15	21.3
Bra017980.1-P	Field mustard	nucleus	27.22	19.87
Bra036520.1-P	Field mustard	nucleus	26.04	19.78
Bra006019.1-P	Field mustard	nucleus	20.71	19.28
Bra009774.1-P	Field mustard	nucleus	25.74	19.12
Bra001365.1-P	Field mustard	nucleus	24.26	19.03
Bra034118.1-P	Field mustard	nucleus	23.67	19.0
Bra019599.1-P	Field mustard	nucleus	24.26	18.98
Bra034119.1-P	Field mustard	nucleus	24.26	18.64
Bra006392.1-P	Field mustard	cytosol	26.92	18.57
Bra021366.1-P	Field mustard	nucleus	26.33	18.54
Bra009379.1-P	Field mustard	nucleus	24.85	18.5
Bra032009.1-P	Field mustard	nucleus	26.04	18.41
Bra001366.1-P	Field mustard	nucleus	22.78	18.29
Bra029844.1-P	Field mustard	nucleus, plastid	23.67	17.58
Bra039745.1-P	Field mustard	nucleus	26.33	16.3
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	23.96	16.07
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	26.04	15.88
Bra012342.1-P	Field mustard	nucleus	23.37	15.52
Bra008567.1-P	Field mustard	nucleus	20.41	15.44
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	25.74	15.34
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	24.26	15.27
Bra010193.1-P	Field mustard	nucleus	27.81	14.78
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	23.67	14.65
Bra028039.1-P	Field mustard	nucleus	23.96	14.57
Bra036744.1-P	Field mustard	nucleus	23.08	14.26
Bra034439.1-P	Field mustard	nucleus	23.67	13.84

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra021471	EnsemblPlants:Bra021471.1	EnsemblPlants:Bra021471.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019725	GO:GO:0071333
InterPro:IPR003441	InterPro:IPR036093	UniProt:M4DY75	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365
PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF40	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI0002544907
SEG:seg	:	:	:	:	:

Description

AT3G44290 (E=9e-164) anac060 | anac060 (Arabidopsis NAC domain containing protein 60); transcription factor

Coordinates

chrA01:-:25092464..25093721

Molecular Weight (calculated)

38151.4 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.356

Length

338 amino acids

Sequence
(BLAST)

001: MAEASRDTSV VSVAVSTAFP GFKFSPTDIE LISYYLKRKM DGLEGSVEII PELDIYNFEP WDLPDKSVVK SESEWFFFCA RGKKYPHGSQ NRRATKMGYW
101: KATGKERNVK SGSEVIGTKR TLVFHIGRAP KGGRTEWIMH EYCMIGISLD ALVVCRLRRN TEFQGATTQK PPSLSLDKNK NMQSEPVSES KSGWENNMFD
201: YYLSGESGHE LLSEITESSQ SSHNPQVPSE EDFYADILRD DIVKLDDPAD SGNTLIDVPR LQSESTTTRV LPLPSMVDKQ MQSLLQKLPL QNDIGEENNI
301: SMSSCFIGIY SIKSINRARW DVVAWVLVMI AVLVFYLV

Best Arabidopsis Sequence Match ( AT3G44290.1 )
(BLAST)

001: MAAAPPIEPA VTTTFPGFKF SPTDIELISY YLKRKMDGLE RSVEIIPEVE IYNFEPWDLP DKSIVKSDSE WFFFCARGKK YPHGSQNRRA TKIGYWKATG
101: KERNVKSGSE VIGTKRTLVF HIGRAPKGGR TEWLMHEYCM IGVSLDALVI CRLRRNTEFQ GSTIQKPPQP SLPLDKHVNL RNEAISESIY GWETMVDFYL
201: SSESGQELLS EIAESSQSSQ NPQVPSEEDF YADILRDEIV KLDDPAVSGN TLINVPRLQT ESNTTRVLPL PDMVDKQMQS LLQKLPLQND TGEENNISMS
301: NCFIGIYSIK SINRARWDVV VWLLVMIAVL VFYLV

Arabidopsis Description

NAC60NAC domain-containing protein 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.