Subcellular Localization
min:
: max
Winner_takes_all: golgi, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021471.1-P | Field mustard | cytosol, golgi, nucleus | 99.7 | 99.7 |
| CDY34716 | Canola | nucleus | 81.36 | 93.54 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 93.49 | 93.22 |
| AT3G44290.1 | Thale cress | cytosol | 85.21 | 85.97 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 64.5 | 63.56 |
| CDX70995 | Canola | cytosol | 62.72 | 63.47 |
| CDY09128 | Canola | cytosol | 63.91 | 62.97 |
| CDX92368 | Canola | cytosol | 61.54 | 62.09 |
| CDX88803 | Canola | cytosol | 61.54 | 61.72 |
| CDY70627 | Canola | cytosol | 20.71 | 42.42 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 42.6 | 41.74 |
| CDY04487 | Canola | cytosol | 42.31 | 41.45 |
| CDY41351 | Canola | plastid | 19.82 | 40.12 |
| CDY71253 | Canola | cytosol | 21.01 | 39.89 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 42.6 | 37.11 |
| KRH22653 | Soybean | nucleus | 39.35 | 35.85 |
| PGSC0003DMT400015077 | Potato | nucleus | 40.83 | 33.82 |
| Solyc06g074170.2.1 | Tomato | nucleus | 40.53 | 33.5 |
| CDX95832 | Canola | nucleus | 22.19 | 33.19 |
| CDX92153 | Canola | nucleus | 22.19 | 33.19 |
| PGSC0003DMT400050482 | Potato | nucleus | 42.01 | 33.02 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 41.72 | 31.19 |
| CDX77674 | Canola | nucleus | 26.04 | 30.99 |
| CDY63046 | Canola | nucleus | 26.33 | 30.69 |
| CDX90431 | Canola | nucleus | 25.15 | 29.72 |
| CDY59580 | Canola | nucleus | 25.74 | 29.59 |
| CDY01508 | Canola | nucleus | 24.85 | 29.37 |
| CDX87703 | Canola | nucleus | 25.44 | 29.25 |
| CDX84070 | Canola | nucleus | 24.26 | 28.98 |
| CDY66060 | Canola | nucleus | 24.26 | 28.67 |
| CDY67205 | Canola | nucleus | 24.26 | 28.67 |
| KRH26664 | Soybean | nucleus | 40.24 | 27.59 |
| CDY44498 | Canola | nucleus | 23.37 | 27.05 |
| CDX78816 | Canola | nucleus | 23.37 | 27.05 |
| CDY10502 | Canola | nucleus | 24.56 | 27.04 |
| CDY42413 | Canola | nucleus | 23.96 | 26.21 |
| CDX67739 | Canola | nucleus | 23.96 | 26.05 |
| CDX86970 | Canola | nucleus | 23.96 | 25.63 |
| CDX81124 | Canola | nucleus | 24.85 | 24.56 |
| CDY44793 | Canola | nucleus | 25.15 | 24.29 |
| CDY46459 | Canola | nucleus | 20.41 | 22.7 |
| CDY43785 | Canola | nucleus | 22.49 | 22.09 |
| CDX84485 | Canola | nucleus | 22.49 | 21.97 |
| CDY08139 | Canola | nucleus | 27.22 | 19.83 |
| CDY05939 | Canola | nucleus | 26.92 | 19.65 |
| CDY19828 | Canola | nucleus | 25.74 | 19.55 |
| CDX78356 | Canola | nucleus | 20.71 | 19.28 |
| CDX88115 | Canola | cytosol | 25.15 | 19.19 |
| CDX69911 | Canola | nucleus | 24.85 | 19.18 |
| CDY00676 | Canola | nucleus | 24.26 | 19.16 |
| CDY41352 | Canola | nucleus | 23.67 | 19.0 |
| CDY00208 | Canola | nucleus | 24.26 | 18.98 |
| CDY21575 | Canola | nucleus | 23.96 | 18.66 |
| CDX80455 | Canola | nucleus | 25.15 | 18.64 |
| CDY41353 | Canola | nucleus | 24.26 | 18.59 |
| CDY49932 | Canola | nucleus | 26.33 | 18.58 |
| CDX78734 | Canola | cytosol | 26.92 | 18.57 |
| CDX70745 | Canola | cytosol | 26.92 | 18.42 |
| CDY28745 | Canola | cytosol | 26.04 | 18.41 |
| CDY43143 | Canola | nucleus | 26.04 | 18.41 |
| CDY16943 | Canola | nucleus | 26.92 | 18.31 |
| CDY00677 | Canola | nucleus | 23.08 | 17.53 |
| CDX73920 | Canola | nucleus | 23.08 | 17.45 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 23.37 | 17.32 |
| CDY00946 | Canola | nucleus | 23.08 | 17.29 |
| CDY08601 | Canola | nucleus, plastid | 23.08 | 17.14 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 24.85 | 16.18 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 24.56 | 16.09 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 26.33 | 16.07 |
| CDY60870 | Canola | nucleus | 26.63 | 15.6 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 25.74 | 15.54 |
| CDY25752 | Canola | nucleus | 23.37 | 15.52 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 25.44 | 15.47 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 25.74 | 15.37 |
| CDY16427 | Canola | nucleus | 26.63 | 15.13 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 23.96 | 15.08 |
| CDX73305 | Canola | nucleus | 23.08 | 14.97 |
| CDY12515 | Canola | plastid | 23.67 | 14.68 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 23.67 | 14.65 |
| CDY70628 | Canola | golgi | 17.16 | 14.65 |
| CDY66161 | Canola | nucleus | 27.51 | 14.65 |
| CDY26922 | Canola | nucleus | 27.51 | 14.62 |
| CDX93723 | Canola | nucleus | 23.96 | 14.57 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 23.37 | 14.03 |
| CDX91785 | Canola | nucleus | 22.19 | 13.91 |
| CDY28397 | Canola | nucleus | 23.67 | 13.84 |
| CDX73304 | Canola | nucleus | 23.67 | 13.72 |
| CDY21216 | Canola | nucleus | 17.46 | 13.72 |
| CDX87118 | Canola | nucleus | 25.15 | 10.22 |
| CDX69392 | Canola | nucleus | 8.88 | 7.01 |
| CDX86969 | Canola | cytosol | 0.59 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HB43 | UniProt:A0A078HB43 | EnsemblPlants:CDY34714 | ProteinID:CDY34714 |
| ProteinID:CDY34714.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00057235001 | InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 |
| PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | TMHMM:TMhelix | UniParc:UPI0004EE6982 |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g33110DBnaA01g33110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HB43]
Coordinates
chrLK032340:-:201993..203249
Molecular Weight (calculated)
38151.4 Da
IEP (calculated)
5.295
GRAVY (calculated)
-0.358
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEASRDTSV VSVAVSTAFP GFKFSPTDIE LISYYLKRKM DGLEGSVEII PELDIYNFEP WDLPDKSVVK SESEWFFFCA RGKKYPHGSQ NRRATKMGYW
101: KATGKERNVK SGSEVIGTKR TLVFHIGRAP KGGRTEWLMH EYCMIGISLD ALVVCRLRRN TEFQGATTQK PPSLSLDKNK NMQSEPVSES KSGWENNMFD
201: YYLSGESGHE LLSEITESSQ SSHNPQVPSE EDFYADILRD DIVKLDDPAD SGNTLIDVPR LQSESTTTRV LPLPSMVDKQ MQSLLQKLPL QNDIGEENNI
301: SMSSCFIGIY SIKSINRARW DVVAWVLVMI AVLVFYLV
101: KATGKERNVK SGSEVIGTKR TLVFHIGRAP KGGRTEWLMH EYCMIGISLD ALVVCRLRRN TEFQGATTQK PPSLSLDKNK NMQSEPVSES KSGWENNMFD
201: YYLSGESGHE LLSEITESSQ SSHNPQVPSE EDFYADILRD DIVKLDDPAD SGNTLIDVPR LQSESTTTRV LPLPSMVDKQ MQSLLQKLPL QNDIGEENNI
301: SMSSCFIGIY SIKSINRARW DVVAWVLVMI AVLVFYLV
001: MAAAPPIEPA VTTTFPGFKF SPTDIELISY YLKRKMDGLE RSVEIIPEVE IYNFEPWDLP DKSIVKSDSE WFFFCARGKK YPHGSQNRRA TKIGYWKATG
101: KERNVKSGSE VIGTKRTLVF HIGRAPKGGR TEWLMHEYCM IGVSLDALVI CRLRRNTEFQ GSTIQKPPQP SLPLDKHVNL RNEAISESIY GWETMVDFYL
201: SSESGQELLS EIAESSQSSQ NPQVPSEEDF YADILRDEIV KLDDPAVSGN TLINVPRLQT ESNTTRVLPL PDMVDKQMQS LLQKLPLQND TGEENNISMS
301: NCFIGIYSIK SINRARWDVV VWLLVMIAVL VFYLV
101: KERNVKSGSE VIGTKRTLVF HIGRAPKGGR TEWLMHEYCM IGVSLDALVI CRLRRNTEFQ GSTIQKPPQP SLPLDKHVNL RNEAISESIY GWETMVDFYL
201: SSESGQELLS EIAESSQSSQ NPQVPSEEDF YADILRDEIV KLDDPAVSGN TLINVPRLQT ESNTTRVLPL PDMVDKQMQS LLQKLPLQND TGEENNISMS
301: NCFIGIYSIK SINRARWDVV VWLLVMIAVL VFYLV
Arabidopsis Description
NAC60NAC domain-containing protein 60 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXL9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.