Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020182.1-P | Field mustard | cytosol | 94.75 | 94.75 |
| CDY09128 | Canola | cytosol | 94.46 | 94.46 |
| CDX70995 | Canola | cytosol | 79.01 | 81.14 |
| CDX92368 | Canola | cytosol | 79.01 | 80.9 |
| CDX88803 | Canola | cytosol | 78.72 | 80.12 |
| AT5G22290.1 | Thale cress | cytosol | 77.84 | 78.53 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 64.72 | 65.49 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 63.56 | 64.5 |
| CDY34716 | Canola | nucleus | 50.44 | 58.84 |
| CDY41351 | Canola | plastid | 21.57 | 44.31 |
| CDY70627 | Canola | cytosol | 21.28 | 44.24 |
| CDY71253 | Canola | cytosol | 20.99 | 40.45 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 40.52 | 40.29 |
| CDY04487 | Canola | cytosol | 40.23 | 40.0 |
| VIT_06s0080g00970.t01 | Wine grape | nucleus | 41.11 | 36.34 |
| KRH22653 | Soybean | nucleus | 39.07 | 36.12 |
| PGSC0003DMT400015077 | Potato | nucleus | 42.27 | 35.54 |
| Solyc06g074170.2.1 | Tomato | nucleus | 41.69 | 34.96 |
| PGSC0003DMT400050482 | Potato | nucleus | 42.27 | 33.72 |
| CDX95832 | Canola | nucleus | 22.16 | 33.63 |
| CDX92153 | Canola | nucleus | 22.16 | 33.63 |
| Solyc11g068750.1.1 | Tomato | nucleus, plasma membrane | 41.69 | 31.64 |
| CDX77674 | Canola | nucleus | 25.95 | 31.34 |
| CDX90431 | Canola | nucleus | 25.95 | 31.12 |
| CDY01508 | Canola | nucleus | 25.66 | 30.77 |
| CDY63046 | Canola | nucleus | 25.95 | 30.69 |
| CDY59580 | Canola | nucleus | 25.95 | 30.27 |
| CDX87703 | Canola | nucleus | 25.36 | 29.59 |
| CDX78816 | Canola | nucleus | 24.49 | 28.77 |
| CDY44498 | Canola | nucleus | 24.49 | 28.77 |
| CDY66060 | Canola | nucleus | 23.91 | 28.67 |
| CDY67205 | Canola | nucleus | 23.91 | 28.67 |
| CDX84070 | Canola | nucleus | 23.62 | 28.62 |
| KRH26664 | Soybean | nucleus | 38.48 | 26.77 |
| CDY10502 | Canola | nucleus | 23.62 | 26.38 |
| CDX67739 | Canola | nucleus | 23.62 | 26.05 |
| CDX86970 | Canola | nucleus | 23.91 | 25.95 |
| CDY42413 | Canola | nucleus | 23.32 | 25.89 |
| CDX81124 | Canola | nucleus | 25.36 | 25.44 |
| CDY44793 | Canola | nucleus | 25.36 | 24.86 |
| CDY43785 | Canola | nucleus | 24.78 | 24.71 |
| CDX84485 | Canola | nucleus | 24.78 | 24.57 |
| CDY46459 | Canola | nucleus | 20.7 | 23.36 |
| CDY41352 | Canola | nucleus | 25.95 | 21.14 |
| CDY00676 | Canola | nucleus | 25.66 | 20.56 |
| CDY19828 | Canola | nucleus | 26.24 | 20.22 |
| CDY41353 | Canola | nucleus | 25.95 | 20.18 |
| CDX88115 | Canola | cytosol | 25.95 | 20.09 |
| CDX69911 | Canola | nucleus | 25.07 | 19.63 |
| CDX78356 | Canola | nucleus | 20.7 | 19.56 |
| CDX80455 | Canola | nucleus | 25.95 | 19.52 |
| CDX73920 | Canola | nucleus | 25.36 | 19.46 |
| CDY05939 | Canola | nucleus | 26.24 | 19.44 |
| CDY21575 | Canola | nucleus | 24.49 | 19.35 |
| CDY00677 | Canola | nucleus | 25.07 | 19.33 |
| CDY00946 | Canola | nucleus | 25.07 | 19.07 |
| CDY00208 | Canola | nucleus | 23.91 | 18.98 |
| CDY08601 | Canola | nucleus, plastid | 25.07 | 18.9 |
| CDY28745 | Canola | cytosol | 26.24 | 18.83 |
| CDY43143 | Canola | nucleus | 26.24 | 18.83 |
| CDY49932 | Canola | nucleus | 26.24 | 18.79 |
| CDY08139 | Canola | nucleus | 25.36 | 18.75 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 24.78 | 18.64 |
| CDX78734 | Canola | cytosol | 26.53 | 18.57 |
| CDX70745 | Canola | cytosol | 26.53 | 18.42 |
| CDY16943 | Canola | nucleus | 26.53 | 18.31 |
| CDY60870 | Canola | nucleus | 27.7 | 16.46 |
| CDY25752 | Canola | nucleus | 24.2 | 16.31 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 24.49 | 16.28 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 26.24 | 16.25 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 26.53 | 16.08 |
| CDY16427 | Canola | nucleus | 27.7 | 15.97 |
| CDX73305 | Canola | nucleus | 24.2 | 15.93 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 25.95 | 15.89 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 24.78 | 15.83 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 25.66 | 15.83 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 23.91 | 15.8 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 24.78 | 15.57 |
| CDY26922 | Canola | nucleus | 28.28 | 15.25 |
| CDY12515 | Canola | plastid | 24.2 | 15.23 |
| CDY70628 | Canola | golgi | 17.49 | 15.15 |
| CDY66161 | Canola | nucleus | 27.99 | 15.12 |
| CDX93723 | Canola | nucleus | 24.2 | 14.93 |
| CDY28397 | Canola | nucleus | 24.2 | 14.36 |
| CDX91785 | Canola | nucleus | 22.45 | 14.29 |
| CDX73304 | Canola | nucleus | 24.2 | 14.24 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 23.32 | 14.21 |
| CDY21216 | Canola | nucleus | 16.91 | 13.49 |
| CDX87118 | Canola | nucleus | 25.66 | 10.58 |
| CDX69392 | Canola | nucleus | 8.16 | 6.54 |
| CDX86969 | Canola | cytosol | 0.58 | 1.87 |
Protein Annotations
| MapMan:15.5.17 | Gene3D:3.30.310.150 | GO:A0A078HD91 | UniProt:A0A078HD91 | EnsemblPlants:CDY35676 | ProteinID:CDY35676 |
| ProteinID:CDY35676.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00059078001 |
| InterPro:IPR003441 | InterPro:IPR036093 | InterPro:NAC-dom | InterPro:NAC_dom_sf | PFAM:PF02365 | PFscan:PS51005 |
| PANTHER:PTHR31989 | PANTHER:PTHR31989:SF40 | SUPFAM:SSF101941 | UniParc:UPI0004EF28EF | SEG:seg | : |
Description
BnaC02g09420DBnaC02g09420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HD91]
Coordinates
chrLK032358:-:42087..43740
Molecular Weight (calculated)
38376.5 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.343
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEAMGGFK DTAASVEAAT VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPETDIYN FEPWDLPDKS IVKSDTEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSSSQVIG TKRTLVFHIG RAPKGERTEW LMHEYCMEGV STDDALVVCR LRRNKEFHTS TSQKAPEPDL PAEKHMIMQN GGGASSSSAH
201: DWASMVDFYL AGESGEELLN EIAETSENLQ VHTEEDFFAD ILKDEIINVD EAVTTGNIAN EVPTLESASK AIRVLPLPSM IDKQMASLLE ESPSQQKKGK
301: GSSGTDQLSS CFVGIYSIKT VNRVRWDVII CLVAFIVMFF CLE
101: GYWKATGKER DVKSSSQVIG TKRTLVFHIG RAPKGERTEW LMHEYCMEGV STDDALVVCR LRRNKEFHTS TSQKAPEPDL PAEKHMIMQN GGGASSSSAH
201: DWASMVDFYL AGESGEELLN EIAETSENLQ VHTEEDFFAD ILKDEIINVD EAVTTGNIAN EVPTLESASK AIRVLPLPSM IDKQMASLLE ESPSQQKKGK
301: GSSGTDQLSS CFVGIYSIKT VNRVRWDVII CLVAFIVMFF CLE
001: MDTKAVGVSK DTAASMEAST VFPGFKFSPT DVELISYYLK RKMDGLERSV EVIPDLEIYN FEPWDLPDKS IVKSDSEWFF FCARGKKYPH GSQNRRATKM
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
101: GYWKATGKER DVKSGSEVIG TKRTLVFHIG RAPKGERTDW IMHEYCVKGV SLDDAMVVCR VRRNKEYNSG TSQKAPKPNS SAEKHAKVQN GATSSGSPSD
201: WDNLVDFYLA GESGEKLLAE MAESSENLQV DNDEDFFADI LRDEIINLDE AVMTGNTPNE VPTLESASME IRVLPLPNMI DKQMSSLLEE RPSQKKKGKD
301: ATESLSSCFV GLYSIKSVNK ARWDVIIGVV ALIAMLFYLE
Arabidopsis Description
NAC089NAC domain-containing protein 89 [Source:UniProtKB/Swiss-Prot;Acc:Q94F58]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.