Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- endoplasmic reticulum 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039859.1-P | Field mustard | cytosol | 72.13 | 100.0 |
| CDY47151 | Canola | cytosol | 72.13 | 100.0 |
| AT4G14455.1 | Thale cress | cytosol, mitochondrion | 66.12 | 93.08 |
| KRH31727 | Soybean | cytosol | 49.18 | 67.67 |
| KRG90380 | Soybean | cytosol | 49.18 | 67.67 |
| PGSC0003DMT400044453 | Potato | cytosol | 47.54 | 65.41 |
| GSMUA_Achr2P04090_001 | Banana | cytosol | 42.62 | 63.93 |
| CDX71964 | Canola | cytosol | 42.08 | 63.11 |
| Os02t0820700-02 | Rice | cytosol | 40.98 | 61.48 |
| CDX98275 | Canola | cytosol | 41.53 | 61.29 |
| Solyc09g089630.2.1 | Tomato | cytosol | 48.09 | 60.69 |
| Zm00001d018507_P002 | Maize | mitochondrion | 39.89 | 60.33 |
| TraesCS6D01G383300.1 | Wheat | cytosol | 38.8 | 58.68 |
| TraesCS6B01G439400.1 | Wheat | cytosol | 38.8 | 58.68 |
| CDY06050 | Canola | mitochondrion | 42.08 | 58.33 |
| TraesCS6A01G399100.1 | Wheat | cytosol | 38.25 | 57.85 |
| Zm00001d031883_P001 | Maize | cytosol | 37.7 | 56.56 |
| EES14052 | Sorghum | cytosol | 37.16 | 55.74 |
| KXG31387 | Sorghum | cytosol | 39.89 | 55.73 |
| CDX67725 | Canola | cytosol | 40.98 | 55.15 |
| Os08t0563300-01 | Rice | cytosol | 36.07 | 54.55 |
| GSMUA_Achr11P... | Banana | cytosol | 35.52 | 53.72 |
| HORVU6Hr1G091720.2 | Barley | cytosol, plastid | 32.79 | 41.38 |
| GSMUA_Achr5P19560_001 | Banana | endoplasmic reticulum, extracellular | 20.77 | 35.19 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, plastid | 43.17 | 32.11 |
Protein Annotations
| EnsemblPlants:CDY12469 | EnsemblPlantsGene:GSBRNA2T00061769001 | Gene3D:1.20.5.110 | GO:A0A078FHI2 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR000727 | InterPro:T_SNARE_dom | PANTHER:PTHR12791 | PANTHER:PTHR12791:SF36 | PFscan:PS50192 |
| ProteinID:CDY12469 | ProteinID:CDY12469.1 | SEG:seg | SUPFAM:SSF58038 | TMHMM:TMhelix | UniParc:UPI0004EF0CEB |
| UniProt:A0A078FHI2 | MapMan:22.7.4.4 | : | : | : | : |
Description
BnaC08g09580DBnaC08g09580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHI2]
Coordinates
chrLK032022:+:861774..863670
Molecular Weight (calculated)
21250.5 Da
IEP (calculated)
10.181
GRAVY (calculated)
-0.426
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTVSFTFLS FGAFPSKQTR NRTFLGSVRT APISLHEFSI GYWTKQIFVR DMNYRRENRA SRTSLFDGLD GLEEGRLRAS SSYSHDTTER DNDEALESLQ
101: DRVSFLKRVT GDIHEEVESH NRMLDKVGNK MDSARGIMSG TINRFKLVFE KKSNRKTCKL IGYFVLLFLV MYYLIRLLNY IKG
101: DRVSFLKRVT GDIHEEVESH NRMLDKVGNK MDSARGIMSG TINRFKLVFE KKSNRKTCKL IGYFVLLFLV MYYLIRLLNY IKG
001: MNFRRENRAS RTSLFDGLDG LEEGRLRASS SYAHDERDND EALENLQDRV SFLKRVTGDI HEEVENHNRL LDKVGNKMDS ARGIMSGTIN RFKLVFEKKS
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
Arabidopsis Description
BET12At4g14455 [Source:UniProtKB/TrEMBL;Acc:Q147J7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.