Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- endoplasmic reticulum 1
- mitochondrion 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031883_P001 | Maize | cytosol | 91.74 | 90.98 |
| EES14052 | Sorghum | cytosol | 91.74 | 90.98 |
| GSMUA_Achr2P04090_001 | Banana | cytosol | 75.21 | 74.59 |
| Os02t0820700-02 | Rice | cytosol | 74.38 | 73.77 |
| Solyc06g008520.2.1 | Tomato | cytosol | 69.42 | 71.79 |
| VIT_07s0005g02990.t01 | Wine grape | cytosol | 72.73 | 71.54 |
| PGSC0003DMT400028259 | Potato | cytosol | 71.9 | 71.31 |
| VIT_05s0051g00940.t01 | Wine grape | cytosol | 70.25 | 69.67 |
| CDX71964 | Canola | cytosol | 68.59 | 68.03 |
| AT3G58170.1 | Thale cress | cytosol | 68.59 | 68.03 |
| CDX98275 | Canola | cytosol | 66.94 | 65.32 |
| CDY06050 | Canola | mitochondrion | 67.77 | 62.12 |
| Bra007383.1-P | Field mustard | cytosol | 66.94 | 61.36 |
| CDX67725 | Canola | cytosol | 65.29 | 58.09 |
| PGSC0003DMT400044453 | Potato | cytosol | 62.81 | 57.14 |
| Bra003325.1-P | Field mustard | cytosol | 51.24 | 52.99 |
| Solyc09g089630.2.1 | Tomato | cytosol | 61.98 | 51.72 |
| Bra039859.1-P | Field mustard | cytosol | 54.55 | 50.0 |
| AT4G14455.1 | Thale cress | cytosol, mitochondrion | 53.72 | 50.0 |
| CDY47151 | Canola | cytosol | 54.55 | 50.0 |
| KRG95641 | Soybean | cytosol, mitochondrion, nucleus | 29.75 | 46.15 |
| PGSC0003DMT400080700 | Potato | cytosol | 67.77 | 43.85 |
| CDY12469 | Canola | plastid | 54.55 | 36.07 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, plastid | 71.9 | 35.37 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.4.4 | EntrezGene:4346340 | EMBL:AK062315 | ProteinID:BAD09626.1 | ProteinID:BAF24439.1 |
| ProteinID:BAT06728.1 | ProteinID:EAZ43676.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR000727 |
| EnsemblPlantsGene:Os08g0563300 | EnsemblPlants:Os08t0563300-01 | PFscan:PS50192 | PANTHER:PTHR12791 | PANTHER:PTHR12791:SF38 | UniProt:Q6ZBW9 |
| SMART:SM00397 | SUPFAM:SSF58038 | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI000023AEB0 | RefSeq:XP_015648254.1 |
Description
Similar to Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-like SNARE 14a) (AtBS14a). (Os08t0563300-01)
Coordinates
chr8:-:28208778..28211676
Molecular Weight (calculated)
13981.6 Da
IEP (calculated)
7.184
GRAVY (calculated)
-0.494
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSRRDFRSH RAALFDGIEE GAIRSSAYSS QIHEHENDQA MDSLHDRVSV LKRLTGDIHE EVENHNRMLD RMGNDMDASR GFLSGTVDKF KMVFETKASR
101: RMATMVASFI SVFFLIYYLT K
101: RMATMVASFI SVFFLIYYLT K
001: MNPRREPRGG RSSLFDGIEE GGIRAASSYS HEINEHENER ALEGLQDRVI LLKRLSGDIN EEVDTHNRML DRMGNDMDSS RGFLSGTMDR FKTVFETKSS
101: RRMLTLVASF VGLFLVIYYL TR
101: RRMLTLVASF VGLFLVIYYL TR
Arabidopsis Description
BET11Bet1-like SNARE 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.