Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67336 | Soybean | cytosol, endoplasmic reticulum | 73.08 | 45.6 |
| KRH32152 | Soybean | endoplasmic reticulum | 69.23 | 42.86 |
| KRH19526 | Soybean | cytosol, endoplasmic reticulum | 69.23 | 42.86 |
| GSMUA_Achr2P04090_001 | Banana | cytosol | 57.69 | 36.89 |
| TraesCS6B01G439400.1 | Wheat | cytosol | 55.13 | 35.54 |
| TraesCS6D01G383300.1 | Wheat | cytosol | 55.13 | 35.54 |
| TraesCS6A01G399100.1 | Wheat | cytosol | 53.85 | 34.71 |
| Zm00001d018507_P002 | Maize | mitochondrion | 53.85 | 34.71 |
| Os02t0820700-02 | Rice | cytosol | 52.56 | 33.61 |
| KXG31387 | Sorghum | cytosol | 53.85 | 32.06 |
| Zm00001d031883_P001 | Maize | cytosol | 50.0 | 31.97 |
| EES14052 | Sorghum | cytosol | 48.72 | 31.15 |
| Os08t0563300-01 | Rice | cytosol | 46.15 | 29.75 |
| KRH31727 | Soybean | cytosol | 48.72 | 28.57 |
| KRG90380 | Soybean | cytosol | 47.44 | 27.82 |
| HORVU6Hr1G091720.2 | Barley | cytosol, plastid | 51.28 | 27.59 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, plastid | 55.13 | 17.48 |
Protein Annotations
| EMBL:ACUP02012124 | EnsemblPlants:KRG95641 | EnsemblPlantsGene:GLYMA_19G162700 | PANTHER:PTHR12791 | PANTHER:PTHR12791:SF38 | ProteinID:KRG95641 |
| ProteinID:KRG95641.1 | SEG:seg | UniParc:UPI0006ED57CF | UniProt:A0A0R0ENA1 | MapMan:22.7.4.4 | : |
Description
hypothetical protein
Coordinates
chr19:-:42344954..42348687
Molecular Weight (calculated)
8983.5 Da
IEP (calculated)
6.239
GRAVY (calculated)
-0.664
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: MNTRRDNRNN RVSLFDGIEE GGIRASSVYS SSHEIDEHDN EQALDGLQDR VNLLKRVSLL LLSTYPRPHL VLCIYKNE
001: MNPRREPRGG RSSLFDGIEE GGIRAASSYS HEINEHENER ALEGLQDRVI LLKRLSGDIN EEVDTHNRML DRMGNDMDSS RGFLSGTMDR FKTVFETKSS
101: RRMLTLVASF VGLFLVIYYL TR
101: RRMLTLVASF VGLFLVIYYL TR
Arabidopsis Description
BET11Bet1-like SNARE 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.