CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER96942
EES02290
EES05123
EES12559
EES14314
EES14570
EES19830
KXG31128
OQU78405
OQU81760
OQU85551

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G58170.1	EES02290	AT3G16310.1	21798944
AT3G58170.1	EES19830	AT3G16310.1	21798944
AT3G58170.1	EES12559	AT3G60600.1	21798944
AT3G58170.1	EES14570	AT3G60600.1	21798944
AT3G58170.1	KXG31128	AT3G60600.1	21798944
AT3G58170.1	EER96942	AT4G26455.1	21798944
AT3G58170.1	EES14314	AT4G26455.1	21798944
AT3G58170.1	OQU81760	AT4G26455.1	21798944
AT3G58170.1	OQU78405	AT5G66480.1	21798944
AT3G58170.1	OQU85551	AT5G66480.1	21798944
AT4G14455.1	EES05123	AT1G27300.1	21798944
AT4G14455.1	EES02290	AT3G16310.1	21798944
AT4G14455.1	EES19830	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031883_P001	Maize	cytosol	98.36	98.36
Os08t0563300-01	Rice	cytosol	90.98	91.74
GSMUA_Achr2P04090_001	Banana	cytosol	80.33	80.33
Solyc06g008520.2.1	Tomato	cytosol	72.13	75.21
VIT_07s0005g02990.t01	Wine grape	cytosol	75.41	74.8
PGSC0003DMT400028259	Potato	cytosol	74.59	74.59
KXG31387	Sorghum	cytosol	78.69	73.28
VIT_05s0051g00940.t01	Wine grape	cytosol	72.13	72.13
AT3G58170.1	Thale cress	cytosol	70.49	70.49
CDX71964	Canola	cytosol	70.49	70.49
CDX98275	Canola	cytosol	68.85	67.74
CDY06050	Canola	mitochondrion	69.67	64.39
Bra007383.1-P	Field mustard	cytosol	68.85	63.64
CDX67725	Canola	cytosol	68.03	61.03
PGSC0003DMT400044453	Potato	cytosol	63.11	57.89
Bra003325.1-P	Field mustard	cytosol	52.46	54.7
Solyc09g089630.2.1	Tomato	cytosol	62.3	52.41
AT4G14455.1	Thale cress	cytosol, mitochondrion	54.92	51.54
CDY47151	Canola	cytosol	55.74	51.52
Bra039859.1-P	Field mustard	cytosol	55.74	51.52
KRG95641	Soybean	cytosol, mitochondrion, nucleus	31.15	48.72
PGSC0003DMT400080700	Potato	cytosol	69.67	45.45
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, plastid	78.69	39.02
CDY12469	Canola	plastid	55.74	37.16

Protein Annotations

EnsemblPlants:EES14052	EnsemblPlantsGene:SORBI_3007G165300	Gene3D:1.20.5.110	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000727	InterPro:T_SNARE_dom	PANTHER:PTHR12791	PANTHER:PTHR12791:SF38	PFscan:PS50192	ProteinID:EES14052
ProteinID:EES14052.2	SUPFAM:SSF58038	TMHMM:TMhelix	UniParc:UPI00081ACEBC	UniProt:C5YMT3	MapMan:22.7.4.4

Description

hypothetical protein

Coordinates

chr7:+:59998003..60001289

Molecular Weight (calculated)

14084.8 Da

IEP (calculated)

7.184

GRAVY (calculated)

-0.522

Length

122 amino acids

Sequence
(BLAST)

001: MNSRRDFRSH RAALFDGIEE GGVRAPAYSS REIHEHENDQ AMDSLHDRVS ILKRLTGDIH EEVENHNRML DRMGNDMDAS RGFLSGTVDK FKMVFETKSS
101: RRMATMVASF IAVFLLIYYL TK

Best Arabidopsis Sequence Match ( AT3G58170.1 )
(BLAST)

001: MNPRREPRGG RSSLFDGIEE GGIRAASSYS HEINEHENER ALEGLQDRVI LLKRLSGDIN EEVDTHNRML DRMGNDMDSS RGFLSGTMDR FKTVFETKSS
101: RRMLTLVASF VGLFLVIYYL TR

Arabidopsis Description

BET11Bet1-like SNARE 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.