Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039859.1-P | Field mustard | cytosol | 93.08 | 91.67 |
| CDY47151 | Canola | cytosol | 93.08 | 91.67 |
| CDY12469 | Canola | plastid | 93.08 | 66.12 |
| KRH31727 | Soybean | cytosol | 66.92 | 65.41 |
| KRG90380 | Soybean | cytosol | 66.15 | 64.66 |
| PGSC0003DMT400044453 | Potato | cytosol | 63.85 | 62.41 |
| GSMUA_Achr2P04090_001 | Banana | cytosol | 58.46 | 62.3 |
| AT3G58170.1 | Thale cress | cytosol | 57.69 | 61.48 |
| Os02t0820700-02 | Rice | cytosol | 57.69 | 61.48 |
| Zm00001d018507_P002 | Maize | mitochondrion | 56.15 | 60.33 |
| TraesCS6D01G383300.1 | Wheat | cytosol | 54.62 | 58.68 |
| TraesCS6B01G439400.1 | Wheat | cytosol | 54.62 | 58.68 |
| Solyc09g089630.2.1 | Tomato | cytosol | 64.62 | 57.93 |
| TraesCS6A01G399100.1 | Wheat | cytosol | 53.85 | 57.85 |
| Zm00001d031883_P001 | Maize | cytosol | 52.31 | 55.74 |
| KXG31387 | Sorghum | cytosol | 56.15 | 55.73 |
| EES14052 | Sorghum | cytosol | 51.54 | 54.92 |
| GSMUA_Achr11P... | Banana | cytosol | 50.77 | 54.55 |
| Os08t0563300-01 | Rice | cytosol | 50.0 | 53.72 |
| HORVU6Hr1G091720.2 | Barley | cytosol, plastid | 43.08 | 38.62 |
| GSMUA_Achr5P19560_001 | Banana | endoplasmic reticulum, extracellular | 29.23 | 35.19 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, plastid | 58.46 | 30.89 |
Protein Annotations
| Gene3D:1.20.5.110 | MapMan:22.7.4.4 | EntrezGene:827091 | ProteinID:AEE83447.1 | EMBL:AK117428 | ArrayExpress:AT4G14455 |
| EnsemblPlantsGene:AT4G14455 | RefSeq:AT4G14455 | TAIR:AT4G14455 | RefSeq:AT4G14455-TAIR-G | EnsemblPlants:AT4G14455.1 | TAIR:AT4G14455.1 |
| Symbol:ATBET12 | EMBL:AY033334 | Unigene:At.46134 | EMBL:BT026096 | ProteinID:CAB10224.1 | ProteinID:CAB78487.1 |
| GO:GO:0000139 | GO:GO:0003674 | GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0006888 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0015031 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | InterPro:IPR000727 | RefSeq:NP_849384.1 |
| PO:PO:0000293 | PFscan:PS50192 | PANTHER:PTHR12791 | PANTHER:PTHR12791:SF36 | UniProt:Q147J7 | UniProt:Q94CG2 |
| SUPFAM:SSF58038 | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI00000ADD8F | : | : |
Description
BET12At4g14455 [Source:UniProtKB/TrEMBL;Acc:Q147J7]
Coordinates
chr4:+:8310319..8312384
Molecular Weight (calculated)
15208.3 Da
IEP (calculated)
9.706
GRAVY (calculated)
-0.544
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFRRENRAS RTSLFDGLDG LEEGRLRASS SYAHDERDND EALENLQDRV SFLKRVTGDI HEEVENHNRL LDKVGNKMDS ARGIMSGTIN RFKLVFEKKS
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
101: NRKSCKLIAY FVLLFLIMYY LIRLLNYIKG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.