Factsheet for Os02t0820700-02

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0509600-01
Os02t0643000-01
Os02t0704600-01
Os04t0471300-01
Os04t0534400-01
Os05t0520100-00
Os08t0156700-01
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G58170.1	Os01t0200500-01	AT3G16310.1	21798944
AT3G58170.1	Os05t0520100-00	AT3G16310.1	21798944
AT3G58170.1	Os02t0643000-01	AT3G60600.1	21798944
AT3G58170.1	Os04t0534400-01	AT3G60600.1	21798944
AT3G58170.1	Os08t0156700-01	AT3G60600.1	21798944
AT3G58170.1	Os04t0471300-01	AT4G26455.1	21798944
AT3G58170.1	Os08t0497900-01	AT4G26455.1	21798944
AT3G58170.1	Os09t0481300-01	AT4G26455.1	21798944
AT3G58170.1	Os02t0704600-01	AT5G66480.1	21798944
AT4G14455.1	Os02t0509600-01	AT1G27300.1	21798944
AT4G14455.1	Os01t0200500-01	AT3G16310.1	21798944
AT4G14455.1	Os05t0520100-00	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018507_P002	Maize	mitochondrion	92.62	93.39
KXG31387	Sorghum	cytosol	93.44	87.02
TraesCS6D01G383300.1	Wheat	cytosol	86.07	86.78
TraesCS6A01G399100.1	Wheat	cytosol	85.25	85.95
TraesCS6B01G439400.1	Wheat	cytosol	85.25	85.95
Solyc06g008520.2.1	Tomato	cytosol	81.15	84.62
PGSC0003DMT400028259	Potato	cytosol	82.79	82.79
GSMUA_Achr2P04090_001	Banana	cytosol	77.87	77.87
AT3G58170.1	Thale cress	cytosol	77.05	77.05
VIT_07s0005g02990.t01	Wine grape	cytosol	76.23	75.61
CDX71964	Canola	cytosol	75.41	75.41
Os08t0563300-01	Rice	cytosol	73.77	74.38
CDX98275	Canola	cytosol	73.77	72.58
VIT_05s0051g00940.t01	Wine grape	cytosol	71.31	71.31
CDY06050	Canola	mitochondrion	74.59	68.94
Bra007383.1-P	Field mustard	cytosol	74.59	68.94
CDX67725	Canola	cytosol	73.77	66.18
Bra003325.1-P	Field mustard	cytosol	55.74	58.12
AT4G14455.1	Thale cress	cytosol, mitochondrion	61.48	57.69
CDY47151	Canola	cytosol	61.48	56.82
Bra039859.1-P	Field mustard	cytosol	61.48	56.82
PGSC0003DMT400044453	Potato	cytosol	61.48	56.39
HORVU6Hr1G091720.2	Barley	cytosol, plastid	64.75	54.48
KRG95641	Soybean	cytosol, mitochondrion, nucleus	33.61	52.56
Solyc09g089630.2.1	Tomato	cytosol	62.3	52.41
PGSC0003DMT400080700	Potato	cytosol	77.05	50.27
CDY12469	Canola	plastid	61.48	40.98
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, plastid	78.69	39.02

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.4.4	EntrezGene:4331172	EMBL:AK061365	EMBL:AK103008	ProteinID:BAD22877.1
ProteinID:BAD23109.1	ProteinID:BAS81623.1	ProteinID:EEE58061.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR000727	EnsemblPlantsGene:Os02g0820700	EnsemblPlants:Os02t0820700-02	PFscan:PS50192	PANTHER:PTHR12791	PANTHER:PTHR12791:SF38
UniProt:Q6K710	SMART:SM00397	SUPFAM:SSF58038	TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI00003B0483
RefSeq:XP_015626198.1	SEG:seg	:	:	:	:

Description

Similar to BS14b. (Os02t0820700-01);Similar to BS14b. (Os02t0820700-02);Similar to BS14b. (Os02t0820700-03)

Coordinates

chr2:+:35234156..35238013

Molecular Weight (calculated)

14023.5 Da

IEP (calculated)

6.263

GRAVY (calculated)

-0.579

Length

122 amino acids

Sequence
(BLAST)

001: MNSRSNYRST RTSLFDGIEE GRIRATSYSS HEIDENENDQ AIDGLQDRVS ILKRLSGDIH EEVETHNRML DRMGNDMDSS RGFLSGTVDK FKMVFETKSS
101: RRMGTLVASF VALFLLVYYL TR

Best Arabidopsis Sequence Match ( AT3G58170.1 )
(BLAST)

001: MNPRREPRGG RSSLFDGIEE GGIRAASSYS HEINEHENER ALEGLQDRVI LLKRLSGDIN EEVDTHNRML DRMGNDMDSS RGFLSGTMDR FKTVFETKSS
101: RRMLTLVASF VGLFLVIYYL TR

Arabidopsis Description

BET11Bet1-like SNARE 1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.