Factsheet for Os02t0704600-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0172100-01
Os02t0158500-00
Os02t0643000-01
Os02t0689500-01
Os02t0704500-01
Os02t0730500-01
Os03t0568500-01
Os03t0701300-00
Os04t0101800-01
Os04t0481300-01
Os04t0534400-01
Os04t0588000-00
Os04t0649900-01
Os05t0170950-00
Os05t0490900-01
Os06t0687600-00
Os07t0147500-01
Os07t0147550-00
Os08t0156700-01
Os09t0513700-01
Os10t0567600-01
Os11t0585700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50910.1	Os02t0730500-01	AT1G54770.1	21798944
AT3G50910.1	Os07t0147500-01	AT1G79040.1	21798944
AT3G50910.1	Os07t0147550-00	AT1G79040.1	21798944
AT3G50910.1	Os11t0585700-01	AT2G20060.1	21798944
AT3G50910.1	Os09t0513700-01	AT2G43370.1	21798944
AT3G50910.1	Os01t0172100-01	AT3G01550.1	21798944
AT3G50910.1	Os05t0170950-00	AT3G01550.1	21798944
AT3G50910.1	Os03t0568500-01	AT3G20510.1	21798944
AT3G50910.1	Os05t0490900-01	AT3G51510.1	21798944
AT3G50910.1	Os02t0689500-01	AT3G60200.1	21798944
AT3G50910.1	Os04t0588000-00	AT3G60200.1	21798944
AT3G50910.1	Os10t0567600-01	AT3G60200.1	21798944
AT3G50910.1	Os02t0643000-01	AT3G60600.1	21798944
AT3G50910.1	Os04t0534400-01	AT3G60600.1	21798944
AT3G50910.1	Os08t0156700-01	AT3G60600.1	21798944
AT3G50910.1	Os03t0701300-00	AT4G02725.1	21798944
AT3G50910.1	Os04t0101800-01	AT5G65683.1	21798944
AT5G66480.1	Os04t0481300-01	AT3G01660.1	21798944
AT5G66480.1	Os02t0704500-01	AT3G50920.1	21798944
AT5G66480.1	Os02t0158500-00	AT5G67210.1	21798944
AT5G66480.1	Os04t0649900-01	AT5G67210.1	21798944
AT5G66480.1	Os06t0687600-00	AT5G67210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020667_P001	Maize	nucleus	25.0	85.71
OQU85551	Sorghum	cytosol, plastid	73.25	73.73
TraesCS6A01G272000.1	Wheat	nucleus	73.03	73.67
TraesCS6D01G252200.1	Wheat	nucleus	72.15	73.27
OQU78405	Sorghum	nucleus	68.42	73.24
TraesCS6B01G299600.1	Wheat	nucleus	73.03	72.71
HORVU6Hr1G068770.1	Barley	nucleus	72.37	72.69
Zm00001d051562_P001	Maize	plastid	67.76	70.07
Zm00001d038964_P001	Maize	nucleus	64.69	69.41
Zm00001d017768_P006	Maize	cytosol	69.96	67.16
GSMUA_Achr2P22980_001	Banana	cytosol, nucleus, peroxisome, plastid	45.61	50.0
GSMUA_Achr6P08980_001	Banana	nucleus	42.11	46.83
GSMUA_Achr1P12060_001	Banana	plastid	40.13	46.45
Bra037167.1-P	Field mustard	mitochondrion	19.74	42.65
Bra036850.1-P	Field mustard	plastid	37.5	41.2
CDX77962	Canola	nucleus, plastid	36.62	40.24
CDX90677	Canola	nucleus	35.96	40.2
CDX73773	Canola	cytosol	36.18	40.05
Bra012880.1-P	Field mustard	nucleus	35.53	39.71
CDY28989	Canola	nucleus	36.18	39.38
KRH08190	Soybean	nucleus	36.62	38.3
AT3G50910.1	Thale cress	cytosol	36.62	37.36
KRH76747	Soybean	plastid	34.65	36.24
VIT_04s0023g02110.t01	Wine grape	endoplasmic reticulum	39.47	36.14
CDY18608	Canola	nucleus	28.73	36.09
Solyc02g085000.2.1	Tomato	nucleus	35.09	34.63
KRH28715	Soybean	cytosol	30.92	34.39
PGSC0003DMT400009054	Potato	nucleus, plastid	35.09	33.26
AT5G66480.1	Thale cress	plastid	31.58	32.43
CDY67893	Canola	nucleus	23.03	30.43
KRH69884	Soybean	nucleus	33.77	21.27

Protein Annotations

EMBL:AK241454	EnsemblPlants:Os02t0704600-01	EnsemblPlantsGene:Os02g0704600	EntrezGene:4330454	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	ncoils:Coil	PANTHER:PTHR35490	ProteinID:BAD08083.1	ProteinID:BAF09775.1	ProteinID:BAS80503.1
ProteinID:EEE57647.1	RefSeq:XP_015625131.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00002368B3	UniProt:Q6YVI2
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os02t0704600-01)

Coordinates

chr2:-:29072649..29076395

Molecular Weight (calculated)

49890.0 Da

IEP (calculated)

4.646

GRAVY (calculated)

-0.653

Length

456 amino acids

Sequence
(BLAST)

001: MPTITHYVLD PLLETGSATQ SQKAASKPPP APPLPQEKAA EKPIPVPVAP VRRAQTASAT LYATPESTSL PDSPSSFPGT WSPYLINHKR RGPCLVKTLS
101: QGDVGSDGSQ QPTLSVTLPP LPKRSQSFEA QEPEFEFQQA SNGVLEGDSG VVETLDWQNG MLQKGKGTVS GEYGHDQAEF EFQHGNPDAT VRPVNVGRPA
201: NGGTPRKINN DAFFELQDSL SMASNSEAED AGGHERWWKP SSPLGTSVGT PGAEFYDAFE EISSDGATRS SQCMDDDLRE MRLSLLMEIE RRKQAEEALE
301: NWQKEWKKLS DHLSLIALTL PPPSLAEDTD DSSMDPGAEL CQQITVSQLV AAAIARGFAR AEVETDMETK IAAKNFEIAR LSDRVQYYEA ANREMSQRNQ
401: EAIEMSRQQR NIRKKRQKWF WGSVGLAVTL GTAAIAWSYL PAAQPQASQD SNTNSD

Best Arabidopsis Sequence Match ( AT3G50910.1 )
(BLAST)

001: MPTFSAIALD RMLEPGASTS VESVPSTTNL FYSKPPISKL EKGKGKLPNE RTVTRPLMSP ALYATPDAIP LPNSPSSFPP SPYIINHKSR GPPRLLKSSS
101: EANVVSSSHQ KTLEEETITA ETDVKVSPRR RSTSFSFPIT EVTEDDYSNG VHARTVGNYN FDGIVDGPVG NWSPLDGKSG NGKSELDNAA NGLERVNGLS
201: EPVPIKTDKE SESEDFYDPG ESASFTSNTD VEGDAGDESS QRLATPVGEF YDAWDELSTD SGMQSSVNNI ESELSEIRLS LLMEIEKRKQ TEEALEQMQI
301: HWQRLREQMA QVGLFVPIDP TASTNNMNLS EELRCQLEIA RFVSDSLGRG MAKAEVEMEM ESMLETKNFE ITRLSDRLHY YEAVNREMSQ RNQEAIEVAR
401: RERQKRKKRQ RWIWGSIAAT ITLGSAALAW SYIPAAKPSS EVSLKDE

Arabidopsis Description

AT3g50910/F18B3_190 [Source:UniProtKB/TrEMBL;Acc:Q94BX2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.