Factsheet for Os11t0585700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034509_P002	Maize	mitochondrion	87.41	85.32
TraesCS6B01G099200.1	Wheat	mitochondrion	84.62	83.74
TraesCS6A01G074600.1	Wheat	mitochondrion	84.27	83.39
TraesCSU01G122900.1	Wheat	mitochondrion	84.27	83.39
OQU90810	Sorghum	mitochondrion	85.31	82.99
HORVU6Hr1G013230.3	Barley	mitochondrion	83.57	82.41
TraesCS5D01G246400.1	Wheat	mitochondrion	83.22	82.35
TraesCS5B01G237900.1	Wheat	mitochondrion	82.17	81.6
CDY72492	Canola	mitochondrion	31.12	78.76
Solyc10g047150.1.1	Tomato	cytosol	17.13	76.56
EES10663	Sorghum	mitochondrion	86.36	74.17
TraesCS5A01G239300.1	Wheat	mitochondrion	83.57	73.99
GSMUA_Achr7P19520_001	Banana	mitochondrion	72.73	70.99
CDY05720	Canola	mitochondrion	70.28	68.84
CDY13887	Canola	mitochondrion	68.53	68.06
CDY31994	Canola	mitochondrion	70.28	67.91
VIT_10s0116g00180.t01	Wine grape	mitochondrion	73.43	66.67
HORVU5Hr1G068590.3	Barley	plastid	82.52	66.48
CDX81955	Canola	mitochondrion	68.53	65.99
Solyc12g088730.1.1	Tomato	endoplasmic reticulum	69.93	65.57
AT2G20060.1	Thale cress	mitochondrion, plastid	68.53	65.33
KRH36504	Soybean	mitochondrion	68.88	63.55
PGSC0003DMT400039845	Potato	mitochondrion	68.88	63.14
KRH11490	Soybean	mitochondrion	69.23	62.46
GSMUA_Achr10P...	Banana	plastid	29.37	50.0
Bra031109.1-P	Field mustard	mitochondrion	67.83	37.74
Os03t0265400-01	Rice	plastid	24.83	21.98

Protein Annotations

MapMan:17.7.1.1.5	Gene3D:3.40.1370.10	EntrezGene:4350797	ProteinID:ABA94446.1	ProteinID:BAF28528.1	ProteinID:BAT14632.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0022626	InterPro:IPR023574	HAMAP:MF_01328_B	EnsemblPlantsGene:Os11g0585700	EnsemblPlants:Os11t0585700-01	PFAM:PF00573
PANTHER:PTHR10746	PANTHER:PTHR10746:SF11	UniProt:Q2R1Z9	InterPro:Ribosomal_L4/L1e	InterPro:Ribosomal_L4_dom_sf	InterPro:Ribosomal_uL4/L1e
SUPFAM:SSF52166	TIGRFAMs:TIGR03953	UniParc:UPI0000681F86	RefSeq:XP_015615460.1	SEG:seg	:

Description

Similar to 50S ribosomal protein L4. (Os11t0585700-01)

Coordinates

chr11:+:22139918..22143513

Molecular Weight (calculated)

31639.8 Da

IEP (calculated)

11.075

GRAVY (calculated)

-0.341

Length

286 amino acids

Sequence
(BLAST)

001: MRALLRAASV LRRAAAPALG GGRAAPLPPK NLPAVCLNGY STLLAPANEV LIPQELLSSK TVWTPDRELG QYEDLVARVT NFHNEDKGFM VLDGDVFDVP
101: IRKDIVHRVV RWQLAKRQQG THSTKTISEV SGTGRKPYNQ KGTGRARHGT LRGPQFRGGA TMHGPKPRSH AIKLQKKVRR LGLKIALSAR TAEGKLLVFD
201: DLEVPSHKTK NIVQYIGQME GTKKVLLVDG GDIDKKLKLA TQNLHYVNVL PSIGLNVYSI LQHDTLVMTR NAINRIVERM HTPISR

Best Arabidopsis Sequence Match ( AT2G20060.1 )
(BLAST)

001: MAASISRRIF RTFGSFSALG RSSSPNLSAN TSGNGLASLT NDLKYGMALL SNRKLSTSIL TPDDSFPSDL LTKKTVLTPD RTIGQYQDLV IPVTNFQNEE
101: KGFMVLAGDV FDVPIRKDII HNVVRWQLAK RQQGTHSTKT LSEVSGTGRK PWNQKGTGRA RHGTLRGPQF RGGCVMHGPK PRSHAIKMNK QVRRLGLKIA
201: LTARAAEGKL LVFDDLGLPT HKTKNIVNYY NQMENTKKVL VVEGGPIDEK LKLATQNLHY VNIIPSIGLN VYSILLHDTL LMSRDAVNKI VERMHTPINR

Arabidopsis Description

50S ribosomal protein L4 [Source:UniProtKB/TrEMBL;Acc:Q8VY61]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.