Factsheet for GSMUA_Achr10P30760_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P19520_001	Banana	mitochondrion	58.93	33.79
Zm00001d034509_P002	Maize	mitochondrion	52.98	30.38
Os11t0585700-01	Rice	mitochondrion	50.0	29.37
TraesCS5D01G246400.1	Wheat	mitochondrion	48.21	28.03
OQU90810	Sorghum	mitochondrion	48.81	27.89
TraesCS5B01G237900.1	Wheat	mitochondrion	47.62	27.78
TraesCS6A01G074600.1	Wheat	mitochondrion	47.62	27.68
TraesCS6B01G099200.1	Wheat	mitochondrion	47.62	27.68
TraesCSU01G122900.1	Wheat	mitochondrion	47.62	27.68
HORVU6Hr1G013230.3	Barley	mitochondrion	47.62	27.59
EES10663	Sorghum	mitochondrion	53.57	27.03
CDY05720	Canola	mitochondrion	46.43	26.71
Solyc10g047150.1.1	Tomato	cytosol	10.12	26.56
CDY13887	Canola	mitochondrion	44.64	26.04
VIT_10s0116g00180.t01	Wine grape	mitochondrion	48.81	26.03
CDY31994	Canola	mitochondrion	45.83	26.01
AT2G20060.1	Thale cress	mitochondrion, plastid	46.43	26.0
CDX81955	Canola	mitochondrion	45.83	25.93
TraesCS5A01G239300.1	Wheat	mitochondrion	49.4	25.7
Solyc12g088730.1.1	Tomato	endoplasmic reticulum	44.64	24.59
PGSC0003DMT400039845	Potato	mitochondrion	44.64	24.04
HORVU5Hr1G068590.3	Barley	plastid	50.0	23.66
KRH36504	Soybean	mitochondrion	41.67	22.58
KRH11490	Soybean	mitochondrion	42.26	22.4
Bra031109.1-P	Field mustard	mitochondrion	45.83	14.98
GSMUA_Achr8P02340_001	Banana	plastid	15.48	9.25
CDY72492	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:3.40.1370.10	MapMan:35.2	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr10G30760_001	EnsemblPlants:GSMUA_Achr10P30760_001
EnsemblPlants:GSMUA_Achr10T30760_001	InterPro:IPR023574	UniProt:M0RMV0	PFAM:PF00573	PANTHER:PTHR10746	PANTHER:PTHR10746:SF11
InterPro:Ribosomal_L4/L1e	InterPro:Ribosomal_L4_dom_sf	InterPro:Ribosomal_uL4/L1e	SUPFAM:SSF52166	UniParc:UPI0002966132	SEG:seg

Description

Putative uncharacterized protein Sb06g014470 [Source:GMGC_GENE;Acc:GSMUA_Achr10G30760_001]

Coordinates

chr10:+:33015953..33021961

Molecular Weight (calculated)

18374.4 Da

IEP (calculated)

10.116

GRAVY (calculated)

-0.196

Length

168 amino acids

Sequence
(BLAST)

001: MIIPLCRQSE LLNKKCGILP GYRGICGSLE VSSVIHSPIS AAQIGPSFLK GGLLSTTCRG FTTLESQESA GVIPPELLTT TTTVLRPDRD IGQYADLVTR
101: VTNFHGEDNG FMVLAGDVFD VPIRKDIIHR VVRWQLAKRQ QGTHPMKTIR EVSGTGKKPY RQKGTGRA

Best Arabidopsis Sequence Match ( AT2G20060.1 )
(BLAST)

001: MAASISRRIF RTFGSFSALG RSSSPNLSAN TSGNGLASLT NDLKYGMALL SNRKLSTSIL TPDDSFPSDL LTKKTVLTPD RTIGQYQDLV IPVTNFQNEE
101: KGFMVLAGDV FDVPIRKDII HNVVRWQLAK RQQGTHSTKT LSEVSGTGRK PWNQKGTGRA RHGTLRGPQF RGGCVMHGPK PRSHAIKMNK QVRRLGLKIA
201: LTARAAEGKL LVFDDLGLPT HKTKNIVNYY NQMENTKKVL VVEGGPIDEK LKLATQNLHY VNIIPSIGLN VYSILLHDTL LMSRDAVNKI VERMHTPINR

Arabidopsis Description

50S ribosomal protein L4 [Source:UniProtKB/TrEMBL;Acc:Q8VY61]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.