Factsheet for Os06t0687600-00

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88850	Sorghum	plastid	79.46	80.42
Zm00001d014532_P001	Maize	plasma membrane	75.6	79.13
TraesCS7A01G443100.1	Wheat	golgi, mitochondrion	73.21	72.14
TraesCS7D01G432300.1	Wheat	golgi, mitochondrion	72.62	71.98
TraesCS7B01G341900.1	Wheat	golgi, mitochondrion	73.21	71.93
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	67.86	67.26
Os02t0158500-00	Rice	plastid	65.48	56.12
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	53.87	55.52
GSMUA_Achr9P25260_001	Banana	golgi	54.17	55.49
VIT_03s0063g00030.t01	Wine grape	plastid	35.71	54.55
Os04t0649900-01	Rice	mitochondrion	51.49	54.4
GSMUA_Achr8P03360_001	Banana	golgi	52.68	53.96
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	44.94	52.43
PGSC0003DMT400066571	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	44.64	47.77
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	44.05	47.13
PGSC0003DMT400065494	Potato	golgi, plasma membrane, plastid	42.26	47.02
VIT_07s0031g00110.t01	Wine grape	golgi	42.56	46.13
KRH50341	Soybean	golgi, plastid	41.67	45.02
CDX81329	Canola	plastid	41.07	44.81
PGSC0003DMT400064322	Potato	plastid	40.48	44.16
AT3G50220.1	Thale cress	endoplasmic reticulum, golgi	42.26	44.1
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	41.37	43.85
Solyc02g093090.1.1	Tomato	extracellular, nucleus	40.18	43.83
CDY30600	Canola	endoplasmic reticulum, golgi	42.26	43.83
CDY17753	Canola	endoplasmic reticulum, golgi	42.26	43.83
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	42.26	43.83
KRH28432	Soybean	mitochondrion	39.88	43.51
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	40.77	43.49
KRH77040	Soybean	mitochondrion	39.29	43.42
KRH70689	Soybean	plastid	41.67	43.34
Bra012143.1-P	Field mustard	plastid	40.48	43.17
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	40.18	42.86
KRH04549	Soybean	plastid	38.39	40.95
KRH57814	Soybean	mitochondrion	38.39	40.82
Bra039840.1-P	Field mustard	plastid	36.9	38.15
CDY62313	Canola	plastid	36.31	38.12
Bra013107.1-P	Field mustard	plastid	37.2	38.11
CDY13145	Canola	plastid	37.2	38.11
CDX89660	Canola	plastid	37.2	37.76
AT2G15440.1	Thale cress	plastid	36.61	37.39
CDY37228	Canola	plastid	35.71	37.15
Os12t0204500-01	Rice	endoplasmic reticulum, golgi	31.85	36.27
Os11t0490100-01	Rice	plasma membrane	29.46	32.78
Os11t0242600-00	Rice	mitochondrion	29.46	31.33
Os11t0488500-01	Rice	cytosol, nucleus	13.1	13.54

Protein Annotations

MapMan:35.1	EntrezGene:4341892	ProteinID:BAD45603.1	ProteinID:BAD46059.1	ProteinID:BAF20322.1	ProteinID:BAS99206.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	EnsemblPlantsGene:Os06g0687600	EnsemblPlants:Os06t0687600-00	PFAM:PF04669
PANTHER:PTHR31444	PANTHER:PTHR31444:SF19	InterPro:Polysacc_synth_dom	UniProt:Q653F8	TIGRFAMs:TIGR01627	TMHMM:TMhelix
UniParc:UPI000043A343	RefSeq:XP_015641746.1	SEG:seg	:	:	:

Description

cdc2 (cyclin-dependent kinase 2) -like geneProtein of unknown function DUF579, plant family protein. (Os06t0687600-00)

Coordinates

chr6:+:28679477..28680929

Molecular Weight (calculated)

35452.3 Da

IEP (calculated)

8.002

GRAVY (calculated)

-0.048

Length

336 amino acids

Sequence
(BLAST)

001: MKGLSGPKLL VVHPSSNKPL GGAASPAMAV LGSRRRMWVV LFLAGFACVS LGTMLCAARD HPPPPVAARR LAAAEAQAAT LAVSARGGGA GGGGGGLPGY
101: VFDALVQYAS AGGNSTASMP GGDVRAIAAV VKRRAPCNFL VFGLGGETPL WRALNHGGRT VFLDENQYYV SHLEGRHPGL EAYDVVYTTT VREFPDLLDA
201: ARAARSAECR PVQNLLYSDC RLAINDLPNQ LYDVAWDIIL VDGPRGYTAA SPGRMSAIFT AGVMARSRAE KGAETDVLVH DYEREVERAC SREFLCEENR
301: VEETSTRSLA HFVVPGGRDL RRETFCAGGG GSGAST

Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA

Arabidopsis Description

IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.