Factsheet for Bra012143.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 2
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G67210.1	Bra012567.1-P	AT4G19030.1	21798944
AT5G67210.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	99.37	99.37
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	98.41	98.41
AT5G67210.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	91.43	90.85
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	82.22	79.94
KRH77040	Soybean	mitochondrion	64.76	67.11
VIT_07s0031g00110.t01	Wine grape	golgi	65.08	66.13
KRH28432	Soybean	mitochondrion	64.44	65.91
KRH04549	Soybean	plastid	65.08	65.08
KRH57814	Soybean	mitochondrion	64.76	64.56
PGSC0003DMT400064322	Potato	plastid	62.86	64.29
PGSC0003DMT400065494	Potato	golgi, plasma membrane, plastid	60.63	63.24
Solyc02g093090.1.1	Tomato	extracellular, nucleus	61.59	62.99
HORVU0Hr1G015370.1	Barley	cytosol, extracellular	36.83	48.54
GSMUA_Achr9P25260_001	Banana	golgi	47.94	46.04
GSMUA_Achr10P...	Banana	extracellular, plasma membrane, plastid	41.59	45.49
Bra013107.1-P	Field mustard	plastid	46.98	45.12
GSMUA_Achr6P29610_001	Banana	endoplasmic reticulum, golgi, plastid	46.35	44.79
HORVU2Hr1G113560.1	Barley	golgi, plasma membrane	42.54	44.52
GSMUA_Achr8P03360_001	Banana	golgi	46.35	44.51
Bra039840.1-P	Field mustard	plastid	45.71	44.31
OQU84413	Sorghum	golgi, mitochondrion	44.76	44.06
TraesCS2A01G512400.1	Wheat	golgi	44.13	43.99
TraesCS2D01G513800.1	Wheat	golgi, plastid	43.81	43.67
Zm00001d015307_P001	Maize	golgi, mitochondrion, plastid	44.76	43.65
Zm00001d014532_P001	Maize	plasma membrane	44.13	43.3
TraesCS6A01G131900.1	Wheat	mitochondrion	44.76	42.99
TraesCS2B01G540300.1	Wheat	golgi	42.86	42.72
TraesCS6D01G121700.1	Wheat	mitochondrion	43.81	42.2
EER88850	Sorghum	plastid	44.13	41.87
TraesCS7B01G341900.1	Wheat	golgi, mitochondrion	45.08	41.52
TraesCS7D01G432300.1	Wheat	golgi, mitochondrion	44.44	41.3
TraesCS7A01G443100.1	Wheat	golgi, mitochondrion	44.44	41.06
KXG27192	Sorghum	golgi, mitochondrion, plastid	42.54	40.98
TraesCS6B01G160200.1	Wheat	mitochondrion	43.17	40.96
Os04t0649900-01	Rice	mitochondrion	41.27	40.88
Os06t0687600-00	Rice	golgi	43.17	40.48
Zm00001d002066_P001	Maize	plasma membrane	42.54	40.0
HORVU7Hr1G100750.3	Barley	endoplasmic reticulum	41.9	38.94
Bra013845.1-P	Field mustard	cytosol	19.68	34.64
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	32.38	34.46
Os02t0158500-00	Rice	plastid	41.59	33.42
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	28.57	32.03
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	29.21	30.98
Bra028013.1-P	Field mustard	golgi	28.89	30.74
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	27.62	30.21
Bra032854.1-P	Field mustard	endoplasmic reticulum	27.62	30.1
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	27.62	29.9
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	26.35	28.72
Bra019203.1-P	Field mustard	plastid	26.98	27.24

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra012143	EnsemblPlants:Bra012143.1	EnsemblPlants:Bra012143.1-P	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009834	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0045492
InterPro:IRX15/IRX15L/IGXM	UniProt:M4D6N4	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF8	InterPro:Polysacc_synth_dom
TIGRFAMs:TIGR01627	TMHMM:TMhelix	UniParc:UPI00025416F4	SEG:seg	:	:

Description

AT5G67210 (E=3e-152) | unknown protein

Coordinates

chrA07:-:9781325..9782272

Molecular Weight (calculated)

35711.4 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.318

Length

315 amino acids

Sequence
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSSNRLWLL AFVSFFTIAF LLTLLYTTDT IISSKNSTVV SSVVNSAVSN TPTSQLPTSA INALLHYASR SNDSFHMSYG
101: EMKSISDVLR RCAPPCNLLV FGLTHETLLW KSLNHNGRTV YIEENRYYAA YFEEIHPEIE VFDVQYTTKA REARELVSAV KEAARNECRP VQNLLFSDCK
201: LGLNDLPNHV YDLDWDVILV DGPRGDGEDV PGRMSSIFTA AVLARSKKSG GNHKTHVFVH DYYREIERLC GDEFLCRENL VESNDMLAHY VLERMDKNST
301: QFCRDRKKRP ASPSP

Best Arabidopsis Sequence Match ( AT5G67210.1 )
(BLAST)

001: MKSGGNTNTK LILVHPYIQK QTSTNRLWLL AFVSFFTIAF LLTLLYTTDS IISSKNNSAT VSSAVNSAVT TATISQLPTT AINAMLHYAS RSNDSYHMSY
101: GEMKSISDVL RRCSPPCNLL VFGLTHETLL WKSLNHNGRT VFIEENRYYA AYFEEIHPEI EVFDVQYTTK AREARELVSA VKEAARNECR PVQNLLFSDC
201: KLGLNDLPNH VYDVDWDVIL VDGPRGDGGD VPGRMSSIFT AAVLARSKKG GNPKTHVFVH DYYRDVERLC GDEFLCRENL VESNDLLAHY VLEKMDKNST
301: QFCRGRKKKR SVSSPSA

Arabidopsis Description

IRX15-LIRX15-L [Source:UniProtKB/TrEMBL;Acc:A0A178UEM8]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.