Factsheet for Bra013845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34323	Canola	plastid	100.0	57.93
Solyc11g020540.1.1	Tomato	cytosol	18.99	50.75
Bra019203.1-P	Field mustard	plastid	84.36	48.4
AT4G24910.1	Thale cress	plastid	80.45	45.71
Solyc11g020470.1.1	Tomato	cytosol	34.08	40.4
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	47.49	33.07
KRH57238	Soybean	golgi	53.07	32.53
GSMUA_Achr9P01440_001	Banana	golgi	46.37	31.68
KRH63768	Soybean	plastid	48.6	29.79
PGSC0003DMT400039556	Potato	golgi	44.13	29.37
KRH54181	Soybean	plastid	49.72	29.28
KRH03967	Soybean	vacuole	52.51	28.4
Zm00001d001763_P001	Maize	plasma membrane	40.22	25.62
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	43.02	25.58
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	37.43	24.91
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	37.99	24.82
OQU82596	Sorghum	plastid	40.78	24.66
TraesCS1A01G365400.1	Wheat	golgi	37.99	24.64
Bra032854.1-P	Field mustard	endoplasmic reticulum	38.55	23.88
Bra030066.1-P	Field mustard	endoplasmic reticulum, plasma membrane	37.43	23.18
Bra004093.1-P	Field mustard	endoplasmic reticulum, golgi	37.43	23.02
Bra034005.1-P	Field mustard	endoplasmic reticulum, golgi	36.31	22.57
Bra034460.1-P	Field mustard	golgi, plasma membrane, vacuole	36.87	22.22
Bra030789.1-P	Field mustard	endoplasmic reticulum, golgi	34.64	22.06
Bra028013.1-P	Field mustard	golgi	36.31	21.96
Bra016131.1-P	Field mustard	endoplasmic reticulum, extracellular	33.52	20.27
Bra036059.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	35.75	19.75
Bra012143.1-P	Field mustard	plastid	34.64	19.68
Bra013107.1-P	Field mustard	plastid	35.2	19.21
Bra039840.1-P	Field mustard	plastid	34.64	19.08
Os11t0488500-01	Rice	cytosol, nucleus	17.88	9.85

Protein Annotations

EnsemblPlants:Bra013845.1	EnsemblPlants:Bra013845.1-P	EnsemblPlantsGene:Bra013845	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444
PANTHER:PTHR31444:SF7	PFAM:PF04669	SEG:seg	TIGRFAMs:TIGR01627	UniParc:UPI000254665F	UniProt:M4DBI5
MapMan:35.1	:	:	:	:	:

Description

AT4G24910 (E=2e-075) | unknown protein

Coordinates

chrA01:-:8044374..8044913

Molecular Weight (calculated)

20248.1 Da

IEP (calculated)

9.463

GRAVY (calculated)

-0.553

Length

179 amino acids

Sequence
(BLAST)

001: MLSSLNTRGI TVIIDDESSK IMTPNNTRVY SLKYHQMEVK NTYKLLRHAR SNPSCAPNMN KLHQGSPDCK LKLKDLPQEV HNTKWDVIVV DGPIGDDLEA
101: SGRMGSIYTA AVLARRGSSN STTDVLVHDV QRTAEKWFSW EFLCQENQVS AKGNLWKFRI KGQSNASRFC SPETSLVRY

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.