Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 58.02 | 59.14 |
| Solyc11g020540.1.1 | Tomato | cytosol | 13.36 | 52.24 |
| Bra013845.1-P | Field mustard | cytosol | 31.68 | 46.37 |
| KRH63768 | Soybean | plastid | 47.71 | 42.81 |
| KRH57238 | Soybean | golgi | 47.71 | 42.81 |
| Solyc11g020470.1.1 | Tomato | cytosol | 24.05 | 41.72 |
| KRH54181 | Soybean | plastid | 46.56 | 40.13 |
| KRH03967 | Soybean | vacuole | 48.47 | 38.37 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 38.55 | 37.55 |
| PGSC0003DMT400039556 | Potato | golgi | 38.55 | 37.55 |
| AT4G24910.1 | Thale cress | plastid | 44.66 | 37.14 |
| TraesCS1A01G365400.1 | Wheat | golgi | 38.93 | 36.96 |
| CDY03407 | Canola | plastid | 43.51 | 36.66 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 38.17 | 36.5 |
| Zm00001d001763_P001 | Maize | plasma membrane | 38.93 | 36.3 |
| CDX92660 | Canola | plastid | 43.13 | 36.22 |
| CDY34323 | Canola | plastid | 42.37 | 35.92 |
| Bra019203.1-P | Field mustard | plastid | 42.37 | 35.58 |
| OQU82596 | Sorghum | plastid | 39.69 | 35.14 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 37.79 | 32.89 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 35.88 | 32.64 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 35.11 | 32.06 |
| GSMUA_Achr9P25260_001 | Banana | golgi | 35.88 | 28.66 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 29.77 | 27.96 |
| GSMUA_Achr6P29610_001 | Banana | endoplasmic reticulum, golgi, plastid | 33.97 | 27.3 |
| GSMUA_Achr8P03360_001 | Banana | golgi | 33.97 | 27.13 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane, plastid | 29.77 | 27.08 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 25.19 | 26.19 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 12.21 | 9.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P01440_001 | EnsemblPlants:GSMUA_Achr9T01440_001 | EnsemblPlantsGene:GSMUA_Achr9G01440_001 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF7 | PFAM:PF04669 | SEG:seg | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002965893 |
| UniProt:M0TWK1 | MapMan:35.1 | : | : | : | : |
Description
Putative Predicted protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G01440_001]
Coordinates
chr9:+:1091769..1092557
Molecular Weight (calculated)
29576.7 Da
IEP (calculated)
9.451
GRAVY (calculated)
-0.363
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPKKLIFIF LLLLSSLSIV RLFKLLWTSS IPAIPEHLPP HAPEKPRHDV DRPREDILSP KEHQLASNII ARRIPCNLLI FGYKPQFLGL ATLNSQGTTV
101: FLEDDPEKLR SGRSKGLRMY PFGNHEKARR AYELLQHARR RPACRPGAGT LRAPRCELAL RGLPEVLYES GWDVVVIDGP SGDGPEAPGR MGAIYTAAVM
201: ARTGRSTDVL VHDTDRTIEK WYSWEFLCHE NLASSKGKLW HFRIEGNSSS DRFCETAASP TQ
101: FLEDDPEKLR SGRSKGLRMY PFGNHEKARR AYELLQHARR RPACRPGAGT LRAPRCELAL RGLPEVLYES GWDVVVIDGP SGDGPEAPGR MGAIYTAAVM
201: ARTGRSTDVL VHDTDRTIEK WYSWEFLCHE NLASSKGKLW HFRIEGNSSS DRFCETAASP TQ
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.