Factsheet for Solyc11g020540.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g020470.1.1	Tomato	cytosol	94.03	41.72
PGSC0003DMT400039556	Potato	golgi	91.04	22.68
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	92.54	20.6
Bra013845.1-P	Field mustard	cytosol	50.75	18.99
GSMUA_Achr9P01440_001	Banana	golgi	52.24	13.36
KRH57238	Soybean	golgi	58.21	13.36
KRH63768	Soybean	plastid	58.21	13.36
KRH54181	Soybean	plastid	59.7	13.16
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	47.76	12.45
Solyc06g064800.1.1	Tomato	extracellular, golgi	46.27	11.74
Solyc07g015920.1.1	Tomato	extracellular	47.76	11.64
KRH03967	Soybean	vacuole	56.72	11.48
CDY03407	Canola	plastid	52.24	11.25
Zm00001d001763_P001	Maize	plasma membrane	46.27	11.03
CDY34323	Canola	plastid	50.75	11.0
Solyc01g103360.2.1	Tomato	plasma membrane	44.78	10.91
Bra019203.1-P	Field mustard	plastid	50.75	10.9
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	43.28	10.78
CDX92660	Canola	plastid	49.25	10.58
TraesCS1A01G365400.1	Wheat	golgi	43.28	10.51
OQU82596	Sorghum	plastid	46.27	10.47
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	41.79	10.22
Solyc11g031950.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	44.78	10.2
AT4G24910.1	Thale cress	plastid	47.76	10.16
Solyc02g093090.1.1	Tomato	extracellular, nucleus	41.79	9.09
Solyc01g107800.2.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	41.79	8.92
Os11t0488500-01	Rice	cytosol, nucleus	11.94	2.46

Protein Annotations

EnsemblPlants:Solyc11g020540.1.1	EnsemblPlantsGene:Solyc11g020540.1	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045492	InterPro:IRX15/IRX15L/IGXM	InterPro:Polysacc_synth_dom	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7
PFAM:PF04669	UniParc:UPI000276950B	UniProt:K4D706	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr11:-:11395031..11395234

Molecular Weight (calculated)

7546.1 Da

IEP (calculated)

6.522

GRAVY (calculated)

-0.316

Length

67 amino acids

Sequence
(BLAST)

1: MSLVTNVPKE VYEVKWDLVI VDGPEGDKPE SPGRMAAIYI VDVVARRSKK NNGTHVLVHD VDRMIEK

Best Arabidopsis Sequence Match ( AT1G67330.1 )
(BLAST)

001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C

Arabidopsis Description

At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.