CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019203.1-P	Field mustard	plastid	91.67	91.67
CDY03407	Canola	plastid	80.77	81.03
CDY34323	Canola	plastid	79.81	80.58
AT4G24910.1	Thale cress	plastid	80.13	79.37
Solyc11g020540.1.1	Tomato	cytosol	10.58	49.25
KRH63768	Soybean	plastid	43.59	46.58
KRH57238	Soybean	golgi	43.27	46.23
KRH54181	Soybean	plastid	44.23	45.39
PGSC0003DMT400039556	Potato	golgi	37.82	43.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, golgi	35.58	43.19
GSMUA_Achr9P01440_001	Banana	golgi	36.22	43.13
KRH03967	Soybean	vacuole	45.19	42.6
Solyc03g110890.1.1	Tomato	plasma membrane, vacuole	39.74	41.2
Solyc11g020470.1.1	Tomato	cytosol	19.23	39.74
Zm00001d001763_P001	Maize	plasma membrane	33.97	37.72
OQU82596	Sorghum	plastid	35.58	37.5
TraesCS1D01G370900.1	Wheat	extracellular, plasma membrane	31.73	36.8
TraesCS1A01G365400.1	Wheat	golgi	31.73	35.87
TraesCS1B01G382900.1	Wheat	plasma membrane, vacuole	31.41	35.77
CDY20685	Canola	endoplasmic reticulum, golgi, plasma membrane	25.96	28.83
CDY31075	Canola	endoplasmic reticulum, golgi, plasma membrane	25.96	28.83
CDY07428	Canola	endoplasmic reticulum, golgi	26.6	28.52
CDX84898	Canola	endoplasmic reticulum	26.28	28.37
CDY27638	Canola	endoplasmic reticulum	26.28	28.37
CDY28894	Canola	endoplasmic reticulum, golgi	26.28	28.18
CDY12639	Canola	endoplasmic reticulum, golgi	25.96	28.12
CDY62313	Canola	plastid	28.53	27.81
CDY37228	Canola	plastid	28.53	27.55
CDY13145	Canola	plastid	28.85	27.44
CDX81329	Canola	plastid	26.92	27.27
CDY48797	Canola	golgi, plasma membrane	25.96	27.27
CDX89660	Canola	plastid	28.85	27.19
CDY51186	Canola	endoplasmic reticulum, plasma membrane	25.64	27.12
CDY30600	Canola	endoplasmic reticulum, golgi	27.56	26.54
CDY17753	Canola	endoplasmic reticulum, golgi	27.56	26.54
CDY12819	Canola	golgi, mitochondrion, plasma membrane, plastid	26.6	26.35
CDY01429	Canola	golgi, mitochondrion, plasma membrane, plastid	26.28	26.03
CDY15292	Canola	golgi	24.36	25.68
CDX96332	Canola	endoplasmic reticulum, extracellular	24.36	25.68
CDX93751	Canola	golgi	24.36	25.68
CDX72815	Canola	endoplasmic reticulum, extracellular	23.72	24.58
CDY37946	Canola	extracellular	20.83	24.53
Os11t0488500-01	Rice	cytosol, nucleus	11.54	11.08

Protein Annotations

MapMan:35.1	GO:A0A078DTJ2	EnsemblPlants:CDX92660	ProteinID:CDX92660	ProteinID:CDX92660.1	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045492	EnsemblPlantsGene:GSBRNA2T00154471001
InterPro:IRX15/IRX15L/IGXM	PFAM:PF04669	PANTHER:PTHR31444	PANTHER:PTHR31444:SF7	InterPro:Polysacc_synth_dom	TIGRFAMs:TIGR01627
UniParc:UPI0004EEB832	SEG:seg	:	:	:	:

Description

BnaC07g39180D

Coordinates

chrLK031873:-:225597..226535

Molecular Weight (calculated)

34771.6 Da

IEP (calculated)

10.091

GRAVY (calculated)

-0.306

Length

312 amino acids

Sequence
(BLAST)

001: MPPQLHQSPL PVLNPLLRFS PPSSPDAPKH QRESKITMPN FTVRKLIPLL IFVLSSLSVI RLLRISLKSS SSASGSLSST TFRSSFSQQI SANASYSALT
101: ENELKLLSDT VASRSPCNVL VFGLAPQYLT LSSINTRGIT VILEDEQSKT KPEVNSNNTR IYSLKYHQME VKNVYKLLRH ARANPACAAL NTNTLHQGSS
201: ECKLKLRDLP QEVHDTRWDV IVVDGPRGDD LEAPGRMGSI YTAAVLARQG SSNSTTDVLV HDVQRTVEKW LSWEFLCQEN QVSAKGNFWK FRIKGRSNAS
301: RFCSPETALI RY

Best Arabidopsis Sequence Match ( AT4G24910.1 )
(BLAST)

001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR

Arabidopsis Description

Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.