Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034460.1-P | Field mustard | golgi, plasma membrane, vacuole | 99.66 | 99.66 |
| CDY15292 | Canola | golgi | 93.6 | 93.92 |
| CDX93751 | Canola | golgi | 93.27 | 93.58 |
| AT1G33800.1 | Thale cress | golgi, plasma membrane | 91.25 | 91.25 |
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 63.97 | 63.33 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 57.91 | 61.21 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 56.9 | 60.14 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 59.26 | 59.86 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 60.94 | 58.77 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 54.21 | 57.71 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 55.89 | 56.08 |
| KRH64803 | Soybean | golgi, plasma membrane | 57.58 | 55.88 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 46.8 | 55.16 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 44.78 | 54.96 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 54.88 | 54.15 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 47.14 | 53.03 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 50.84 | 50.67 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 51.18 | 50.67 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 50.84 | 50.33 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 51.18 | 50.33 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 50.51 | 50.17 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 50.51 | 49.83 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 50.84 | 49.35 |
| EES16857 | Sorghum | mitochondrion | 49.49 | 48.51 |
| CDY37946 | Canola | extracellular | 43.1 | 48.3 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 46.8 | 47.12 |
| HORVU7Hr1G120340.1 | Barley | plastid | 51.18 | 42.58 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 41.75 | 42.03 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 40.74 | 42.01 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 45.12 | 41.1 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 44.78 | 41.05 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 40.07 | 40.89 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 44.44 | 40.87 |
| CDY27638 | Canola | endoplasmic reticulum | 39.73 | 40.83 |
| CDX84898 | Canola | endoplasmic reticulum | 39.73 | 40.83 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 39.73 | 40.55 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 45.45 | 38.14 |
| EES08266 | Sorghum | mitochondrion | 39.39 | 35.67 |
| Os11t0242600-00 | Rice | mitochondrion | 37.71 | 35.44 |
| CDX81329 | Canola | plastid | 29.97 | 28.9 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.64 | 28.89 |
| CDY03407 | Canola | plastid | 29.97 | 28.62 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.3 | 28.57 |
| CDY37228 | Canola | plastid | 30.98 | 28.48 |
| CDY34323 | Canola | plastid | 29.29 | 28.16 |
| CDY62313 | Canola | plastid | 30.3 | 28.12 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 30.3 | 27.78 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 30.3 | 27.78 |
| CDY13145 | Canola | plastid | 30.64 | 27.74 |
| CDX89660 | Canola | plastid | 30.64 | 27.49 |
| CDX92660 | Canola | plastid | 27.27 | 25.96 |
Protein Annotations
| MapMan:21.2.2.2.3 | GO:A0A078IFL4 | UniProt:A0A078IFL4 | EnsemblPlants:CDY48797 | ProteinID:CDY48797 | ProteinID:CDY48797.1 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | EnsemblPlantsGene:GSBRNA2T00091722001 | InterPro:IRX15/IRX15L/IGXM | PFAM:PF04669 |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF2 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0004EE6675 |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g20730DBnaA05g20730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFL4]
Coordinates
chrLK032792:+:72525..73486
Molecular Weight (calculated)
33763.0 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.467
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTKSQSSVN LKVIFTCCSI LIFLIIFFAR SNISSSSSKP LSETNLSQEE VENQHKPKGC PTTQQCTKMP ISLSDALVHY VTSNVTPQQT FDEISVSKRV
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDKAWI ETVTNKFPNL ESYHVVYDTK VKNSDKLMEL GRSEECTSVT DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARTGRPFCP VDVDRRR
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDKAWI ETVTNKFPNL ESYHVVYDTK VKNSDKLMEL GRSEECTSVT DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARTGRPFCP VDVDRRR
001: MRTKSPSSLN LKVIFIGSSI LILIIIYLAR SNISSSSSKP ISKTNLSQEE EETQHKQEGC PTTQQCTKMP LSLSDALVHY VTSNVTPQQT FDEVSVSKRV
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDQAWI AIVTKKFPNL ESYHVVYDTK VKDSDKLMEL GRSEECRSVS DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARAGRPFCP VEVDRRR
101: LDKKSPCNFL VFGLGHDSLM WASLNHGGRT LFIEEDQAWI AIVTKKFPNL ESYHVVYDTK VKDSDKLMEL GRSEECRSVS DPRNSKCDLA LKDFPADFYE
201: TKWDLIMVDA PTGYHEEAPG RMSAIYTAGL LARNREDGET DVFVHDVNRP VEDEFSATFL CKGYMREQNG RLRHFTIPSH RARAGRPFCP VEVDRRR
Arabidopsis Description
GXM3GXMT1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7W0]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.