Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0238g00020.t01 | Wine grape | extracellular, plasma membrane | 65.36 | 66.67 |
| Solyc11g031950.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 63.07 | 65.65 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 65.03 | 64.61 |
| KRH50678 | Soybean | cytosol | 13.73 | 59.15 |
| AT4G09990.1 | Thale cress | golgi | 54.9 | 57.93 |
| CDY48797 | Canola | golgi, plasma membrane | 55.88 | 57.58 |
| VIT_00s0238g00030.t01 | Wine grape | extracellular, plasma membrane | 45.42 | 57.44 |
| Bra034460.1-P | Field mustard | golgi, plasma membrane, vacuole | 55.56 | 57.24 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 46.73 | 56.75 |
| AT1G33800.1 | Thale cress | golgi, plasma membrane | 54.9 | 56.57 |
| Bra028013.1-P | Field mustard | golgi | 54.58 | 56.42 |
| CDX93751 | Canola | golgi | 54.58 | 56.42 |
| CDY15292 | Canola | golgi | 54.58 | 56.42 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 50.98 | 55.91 |
| AT1G71690.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 53.59 | 55.59 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 50.65 | 55.36 |
| Bra016131.1-P | Field mustard | endoplasmic reticulum, extracellular | 53.27 | 55.07 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 53.27 | 55.07 |
| Solyc06g064800.1.1 | Tomato | extracellular, golgi | 46.73 | 54.17 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 53.27 | 54.15 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 48.69 | 50.0 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 48.69 | 49.83 |
| CDY37946 | Canola | extracellular | 43.14 | 49.81 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 48.37 | 49.33 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 48.04 | 49.0 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 46.73 | 48.47 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 48.04 | 48.04 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 47.39 | 48.01 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 47.06 | 47.84 |
| EES16857 | Sorghum | mitochondrion | 46.41 | 46.86 |
| KRH50677 | Soybean | mitochondrion | 14.71 | 40.91 |
| HORVU7Hr1G120340.1 | Barley | plastid | 47.06 | 40.34 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 36.6 | 39.44 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 41.5 | 39.2 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 41.18 | 39.01 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 41.18 | 38.65 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 33.99 | 37.55 |
| KRH42675 | Soybean | endoplasmic reticulum | 34.97 | 37.41 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 35.29 | 36.49 |
| KRG94533 | Soybean | golgi, mitochondrion | 35.62 | 35.39 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 40.85 | 35.31 |
| KRG97408 | Soybean | plastid | 36.6 | 35.0 |
| Os11t0242600-00 | Rice | mitochondrion | 34.97 | 33.86 |
| EES08266 | Sorghum | mitochondrion | 35.62 | 33.23 |
| KRH50341 | Soybean | golgi, plastid | 32.68 | 32.15 |
| KRH77040 | Soybean | mitochondrion | 30.72 | 30.92 |
| KRH57238 | Soybean | golgi | 29.41 | 30.82 |
| KRH70689 | Soybean | plastid | 32.03 | 30.34 |
| KRH28432 | Soybean | mitochondrion | 29.74 | 29.55 |
| KRH57814 | Soybean | mitochondrion | 29.74 | 28.8 |
| KRH04549 | Soybean | plastid | 29.41 | 28.57 |
| KRH63768 | Soybean | plastid | 27.12 | 28.42 |
| KRH54181 | Soybean | plastid | 27.45 | 27.63 |
| KRH03967 | Soybean | vacuole | 27.78 | 25.68 |
Protein Annotations
| EMBL:ACUP02002775 | EnsemblPlants:KRH64803 | EnsemblPlantsGene:GLYMA_04G255800 | EntrezGene:100780444 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF2 | PFAM:PF04669 | ProteinID:KRH64803 | ProteinID:KRH64803.1 | SEG:seg |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0001CAE6F4 | UniProt:I1JZD7 | MapMan:21.2.2.2.3 | : |
Description
hypothetical protein
Coordinates
chr4:-:52215102..52216674
Molecular Weight (calculated)
34460.0 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.311
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSKTTQFTC TFKVALLSLA VFCLFILVFR SSIFSLSPQL TSQTNMSSSD TIVPVSPQET ENAGTPSSSS CPNSPPLNPP CTKAPPSLAN AIIHYATANV
101: TPQQTLHEIS VSARVLEKKS PCNFLVFGLG HDSLMWTSLN YGGRTVFLEE DKSWIDQIQE KVPSLESYHV MYDTQVHQAE ELMKTGMKED CQKVTDPRFS
201: RCPLAHKGLP SEVYDIDWDV IMVDAPTGYF DEAPGRMSAI YTAGLIARNK ERGQTDVFVH DVDRKVEDMF SKAFLCEGYF KEQEGRIRHF NIPSHRSRLW
301: RPFCPE
101: TPQQTLHEIS VSARVLEKKS PCNFLVFGLG HDSLMWTSLN YGGRTVFLEE DKSWIDQIQE KVPSLESYHV MYDTQVHQAE ELMKTGMKED CQKVTDPRFS
201: RCPLAHKGLP SEVYDIDWDV IMVDAPTGYF DEAPGRMSAI YTAGLIARNK ERGQTDVFVH DVDRKVEDMF SKAFLCEGYF KEQEGRIRHF NIPSHRSRLW
301: RPFCPE
001: MRNKSQSFIS SKLIFICCSI LVLFILFLKR ASFSSNSTAT IRDEYHQKSK CPSTPQQCTK LPTSLSDALV HYVTSEITPQ QTFDEVSVSK RVLDKKSPCN
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF
101: FLVFGLGHDS LMWASLNHGG RTLFLEEDEA WIETVTKKFP NLESYHVVYD TKVKDSNKLM ELKRTEDCKA VSDPRDSKCA LSLKGFPADV YETQWDVIMV
201: DAPTGYHDEA PGRMSAIYTA GLLARNRYDG GETDVFVHDI NRPVEDEFSV AFLCGGYMKE QQGRLRHFNI PSHRASFGTP FCPADISRRF
Arabidopsis Description
GXM2Glucuronoxylan 4-O-methyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0F7]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.