Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- golgi 3
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
endoplasmic reticulum:
27224218
endoplasmic reticulum: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 88.81 | 91.7 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 68.88 | 69.37 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 64.34 | 65.48 |
| KRG97408 | Soybean | plastid | 68.53 | 61.25 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 59.79 | 60.64 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 61.19 | 60.55 |
| CDY27638 | Canola | endoplasmic reticulum | 60.84 | 60.21 |
| CDX84898 | Canola | endoplasmic reticulum | 60.84 | 60.21 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 60.84 | 60.21 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 60.84 | 60.21 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 59.79 | 59.38 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 59.79 | 59.38 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 60.14 | 58.31 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 58.74 | 57.73 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 58.74 | 57.73 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 58.74 | 57.73 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 56.64 | 57.45 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 58.04 | 57.04 |
| PGSC0003DMT400077009 | Potato | extracellular | 52.8 | 54.91 |
| Solyc07g015920.1.1 | Tomato | extracellular | 52.45 | 54.55 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 53.15 | 52.78 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 52.1 | 51.92 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.05 | 49.32 |
| KRG94533 | Soybean | golgi, mitochondrion | 51.4 | 47.73 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 48.6 | 47.6 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 48.6 | 47.44 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 48.25 | 47.26 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.25 | 46.78 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 47.9 | 46.44 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 47.9 | 46.44 |
| Zm00001d007327_P001 | Maize | plasma membrane | 48.95 | 45.6 |
| Os11t0490100-01 | Rice | plasma membrane | 47.9 | 45.36 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 39.51 | 40.36 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 47.55 | 40.0 |
| KRH50678 | Soybean | cytosol | 9.79 | 39.44 |
| KRH64803 | Soybean | golgi, plasma membrane | 37.41 | 34.97 |
| KRH50341 | Soybean | golgi, plastid | 34.62 | 31.83 |
| KRH50677 | Soybean | mitochondrion | 12.24 | 31.82 |
| KRH70689 | Soybean | plastid | 34.27 | 30.34 |
| KRH77040 | Soybean | mitochondrion | 31.82 | 29.93 |
| KRH28432 | Soybean | mitochondrion | 31.47 | 29.22 |
| KRH57814 | Soybean | mitochondrion | 31.47 | 28.48 |
| KRH04549 | Soybean | plastid | 31.12 | 28.25 |
| KRH57238 | Soybean | golgi | 27.62 | 27.05 |
| KRH63768 | Soybean | plastid | 26.92 | 26.37 |
| KRH54181 | Soybean | plastid | 27.27 | 25.66 |
| KRH03967 | Soybean | vacuole | 27.62 | 23.87 |
Protein Annotations
| EntrezGene:100820087 | MapMan:35.1 | EMBL:ACUP02004822 | EnsemblPlantsGene:GLYMA_08G104600 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0045492 | UniProt:I1KS24 | InterPro:IRX15/IRX15L/IGXM | EnsemblPlants:KRH42675 | ProteinID:KRH42675 | ProteinID:KRH42675.1 |
| PFAM:PF04669 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix |
| UniParc:UPI0002338C8A | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:8044684..8046304
Molecular Weight (calculated)
32706.6 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.170
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLANERMKS RWFVWLLAVL GIIGATLFIV SLIQTSENNF LCSITRTMQQ QQQQFTDGPT SMQLKAILHY ATSQIVPQQS LSEITITFDV LQSLHRPANF
101: LVFGLGRDSL MWASLNPHGT TLFLEEDPKW FGIVTKEAPY LRAHTVRYRT QLREADSLMS SYRSEPACFP ATATLRGNER CKLALHNLPD EVYEKEWDLI
201: MIDAPKGYFA EAPGRMAAIF SAAVMARDRK GSGVTHVFLH DVDRKVEKVY AEEFLCRKHL VKGVGRLWHF EIPPMGNNTR DYARFC
101: LVFGLGRDSL MWASLNPHGT TLFLEEDPKW FGIVTKEAPY LRAHTVRYRT QLREADSLMS SYRSEPACFP ATATLRGNER CKLALHNLPD EVYEKEWDLI
201: MIDAPKGYFA EAPGRMAAIF SAAVMARDRK GSGVTHVFLH DVDRKVEKVY AEEFLCRKHL VKGVGRLWHF EIPPMGNNTR DYARFC
001: MNTLIPSEKR WIITGVLLAG LVGGALLFTS FIRAADETLF LCSTASAKSR AVAAAADYEA TPIQLQAIVH YATSNVVPQQ NLAEISISFN ILKKLAPANF
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
101: LVFGLGRDSL MWASLNPRGK TLFLEEDLEW FQKVTKDSPF LRAHHVRYRT QLQQADSLLR SYKTEPKCFP AKSYLRGNEK CKLALTGLPD EFYDTEWDLL
201: MVDAPKGYFA EAPGRMAAIF SAAVMARNRK KPGVTHVFLH DVNRRVEKTF AEEFLCRKYR VNAAGRLWHF AIPPAAANAT IDSGDYRFC
Arabidopsis Description
Probable methyltransferase At1g27930 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7F9]
SUBAcon: [plasma membrane,endoplasmic reticulum]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.