Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G492500.1 | Wheat | extracellular | 78.48 | 81.16 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 78.48 | 81.16 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 78.15 | 80.55 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 76.82 | 78.64 |
| Zm00001d007327_P001 | Maize | plasma membrane | 79.14 | 77.85 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 75.5 | 77.29 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 74.83 | 76.61 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 75.17 | 66.76 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 55.3 | 57.99 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 52.98 | 55.75 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 48.01 | 49.83 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 47.35 | 49.65 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 47.35 | 49.65 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 47.68 | 49.48 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 47.68 | 49.48 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 46.36 | 49.3 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 45.03 | 49.1 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 45.7 | 48.94 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 47.02 | 48.8 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 46.69 | 48.79 |
| CDX84898 | Canola | endoplasmic reticulum | 46.69 | 48.79 |
| CDY27638 | Canola | endoplasmic reticulum | 46.69 | 48.79 |
| KRH42675 | Soybean | endoplasmic reticulum | 45.36 | 47.9 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 46.69 | 47.8 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 45.36 | 47.4 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 44.04 | 47.33 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 44.7 | 46.71 |
| KRG97408 | Soybean | plastid | 47.02 | 44.38 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 41.39 | 44.33 |
| PGSC0003DMT400077009 | Potato | extracellular | 39.07 | 42.91 |
| Solyc07g015920.1.1 | Tomato | extracellular | 39.07 | 42.91 |
| KRH06938 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 41.06 | 41.89 |
| KRG94533 | Soybean | golgi, mitochondrion | 41.39 | 40.58 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 37.42 | 38.31 |
| Os11t0242600-00 | Rice | mitochondrion | 32.12 | 30.7 |
| Os06t0687600-00 | Rice | golgi | 32.78 | 29.46 |
| Os04t0649900-01 | Rice | mitochondrion | 29.47 | 27.99 |
| Os02t0158500-00 | Rice | plastid | 35.1 | 27.04 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 13.58 | 12.62 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4350540 | ProteinID:ABA93808.1 | EMBL:AK108872 | ProteinID:BAF28286.1 | ProteinID:BAT14083.1 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 |
| InterPro:IRX15/IRX15L/IGXM | EnsemblPlantsGene:Os11g0490100 | EnsemblPlants:Os11t0490100-01 | PFAM:PF04669 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 |
| InterPro:Polysacc_synth_dom | UniProt:Q2R441 | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0000682263 | RefSeq:XP_015616406.1 |
| SEG:seg | : | : | : | : | : |
Description
Protein of unknown function DUF579, plant family protein. (Os11t0490100-01)
Coordinates
chr11:+:17284028..17285405
Molecular Weight (calculated)
32086.7 Da
IEP (calculated)
9.436
GRAVY (calculated)
-0.038
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMPGRLLAA GAAALLVAAS VMVATLLTAP LPFLPSLMPC LPAVTAPSGS GYSPPGLAAL ADAAVRYATT PTVPQQSRAE ISLSLAVLRR RAPLRLLVFG
101: LGHDSPLWHA LNPGGATVFL EEDPSWYSVV RGQSPFLRGH LVAYRTRLDH ADRLLATYKD HPSCLPGGGG NGGGDVPRVR GNAECPLALH NLPAEVYEKE
201: WDMVMIDAPK GYFASAPGRM AAVWTAAAMA RGRRGEGDTD VFLHDVDRRV EKAYAEEFLC ERFRVGATGR LWHFRIPPAS RRGNGTAAAG GAGAGDGRRP
301: FC
101: LGHDSPLWHA LNPGGATVFL EEDPSWYSVV RGQSPFLRGH LVAYRTRLDH ADRLLATYKD HPSCLPGGGG NGGGDVPRVR GNAECPLALH NLPAEVYEKE
201: WDMVMIDAPK GYFASAPGRM AAVWTAAAMA RGRRGEGDTD VFLHDVDRRV EKAYAEEFLC ERFRVGATGR LWHFRIPPAS RRGNGTAAAG GAGAGDGRRP
301: FC
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.