Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- golgi 5
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 99.65 | 99.65 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 98.26 | 95.93 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 88.89 | 87.97 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 88.89 | 87.97 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 86.46 | 85.57 |
| CDX84898 | Canola | endoplasmic reticulum | 65.62 | 65.4 |
| CDY27638 | Canola | endoplasmic reticulum | 65.62 | 65.4 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 61.11 | 62.63 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 60.42 | 61.27 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 58.68 | 61.01 |
| KRH42675 | Soybean | endoplasmic reticulum | 59.38 | 59.79 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.6 | 57.8 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 55.56 | 56.74 |
| KRG97408 | Soybean | plastid | 61.81 | 55.62 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 54.17 | 54.36 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 52.43 | 52.43 |
| Solyc07g015920.1.1 | Tomato | extracellular | 48.61 | 50.91 |
| PGSC0003DMT400077009 | Potato | extracellular | 47.92 | 50.18 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 48.61 | 47.95 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 48.61 | 47.95 |
| Zm00001d007327_P001 | Maize | plasma membrane | 51.04 | 47.88 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 48.61 | 47.78 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 48.61 | 47.46 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 48.61 | 47.46 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 48.61 | 47.46 |
| Os11t0490100-01 | Rice | plasma membrane | 49.65 | 47.35 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 42.01 | 43.06 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 41.67 | 42.7 |
| CDY15292 | Canola | golgi | 42.71 | 41.55 |
| CDX93751 | Canola | golgi | 42.71 | 41.55 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 48.26 | 40.88 |
| CDY48797 | Canola | golgi, plasma membrane | 42.01 | 40.74 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 38.89 | 37.84 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 38.19 | 36.54 |
| CDY37946 | Canola | extracellular | 29.51 | 32.08 |
| CDY37228 | Canola | plastid | 32.64 | 29.1 |
| CDX81329 | Canola | plastid | 30.9 | 28.9 |
| CDY62313 | Canola | plastid | 31.25 | 28.12 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 31.6 | 28.09 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 31.6 | 28.09 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.56 | 27.94 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.21 | 27.62 |
| CDY03407 | Canola | plastid | 29.51 | 27.33 |
| CDY13145 | Canola | plastid | 30.9 | 27.13 |
| CDX89660 | Canola | plastid | 30.9 | 26.89 |
| CDY34323 | Canola | plastid | 28.82 | 26.86 |
| CDX92660 | Canola | plastid | 28.12 | 25.96 |
Protein Annotations
| MapMan:35.1 | GO:A0A078FI19 | UniProt:A0A078FI19 | EnsemblPlants:CDY12639 | ProteinID:CDY12639 | ProteinID:CDY12639.1 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | EnsemblPlantsGene:GSBRNA2T00070152001 | InterPro:IRX15/IRX15L/IGXM | PFAM:PF04669 |
| PANTHER:PTHR31444 | PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0004EEE4D3 |
| SEG:seg | : | : | : | : | : |
Description
BnaA02g13070DBnaA02g13070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI19]
Coordinates
chrLK032025:+:409413..410279
Molecular Weight (calculated)
32338.8 Da
IEP (calculated)
7.859
GRAVY (calculated)
-0.199
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MNHKSAKHTL LERPWFIVLA LAGLIGGAVL ITSFIRSTDN TLSLCSTAKT TAKSIAEYTA TPIQLQSIVH YATSRTVPQQ TFDEISISLE VLKDRLPCNF
101: LVFGLGRDSL MWASLNPGGT TVFMEEDPEW IQAVLKDAPS LRAHHVQYRT QLSQADRLLK TYRSEPKCLP ANAFPIRYNE KCPLALTSLP DEFYDTEWDL
201: IMVDAPKGYF ATAPGRMAAI FSSAVMARNR KGAGTTHVFL HDVDRKVEKA YANEFLCEKY RVKSAGRLWH FEIPNADNMS DQPGDRFC
101: LVFGLGRDSL MWASLNPGGT TVFMEEDPEW IQAVLKDAPS LRAHHVQYRT QLSQADRLLK TYRSEPKCLP ANAFPIRYNE KCPLALTSLP DEFYDTEWDL
201: IMVDAPKGYF ATAPGRMAAI FSSAVMARNR KGAGTTHVFL HDVDRKVEKA YANEFLCEKY RVKSAGRLWH FEIPNADNMS DQPGDRFC
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [golgi,endoplasmic reticulum]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.