Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030789.1-P | Field mustard | endoplasmic reticulum, golgi | 98.22 | 98.22 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 96.44 | 96.44 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 88.97 | 88.65 |
| Solyc01g103360.2.1 | Tomato | plasma membrane | 70.82 | 72.36 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 70.46 | 71.74 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 69.04 | 68.31 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 69.04 | 66.9 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 66.19 | 66.43 |
| KRH50678 | Soybean | cytosol | 15.3 | 60.56 |
| CDY48797 | Canola | golgi, plasma membrane | 61.21 | 57.91 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 56.58 | 56.99 |
| CDX93751 | Canola | golgi | 59.79 | 56.76 |
| CDY15292 | Canola | golgi | 59.79 | 56.76 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 49.47 | 55.16 |
| CDX96332 | Canola | endoplasmic reticulum, extracellular | 54.8 | 52.03 |
| CDX72815 | Canola | endoplasmic reticulum, extracellular | 54.45 | 50.83 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 54.09 | 50.67 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 53.38 | 50.0 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 53.02 | 50.0 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 52.67 | 49.5 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 51.6 | 49.15 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 52.31 | 48.68 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 51.96 | 48.51 |
| EES16857 | Sorghum | mitochondrion | 51.96 | 48.18 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 51.96 | 47.71 |
| CDY37946 | Canola | extracellular | 42.35 | 44.91 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 42.7 | 41.67 |
| HORVU7Hr1G120340.1 | Barley | plastid | 52.31 | 41.18 |
| KRH50677 | Soybean | mitochondrion | 16.01 | 40.91 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 46.98 | 40.74 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 42.35 | 40.34 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 46.26 | 40.25 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 41.64 | 40.21 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 46.26 | 39.88 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 41.28 | 39.86 |
| CDX84898 | Canola | endoplasmic reticulum | 40.57 | 39.45 |
| CDY27638 | Canola | endoplasmic reticulum | 40.57 | 39.45 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 46.62 | 37.01 |
| Os11t0242600-00 | Rice | mitochondrion | 39.86 | 35.44 |
| EES08266 | Sorghum | mitochondrion | 40.21 | 34.45 |
| Zm00001d003239_P001 | Maize | cytosol | 18.15 | 30.54 |
| CDY03407 | Canola | plastid | 31.67 | 28.62 |
| CDY12819 | Canola | golgi, mitochondrion, plasma membrane, plastid | 32.03 | 28.57 |
| CDY37228 | Canola | plastid | 32.74 | 28.48 |
| CDY62313 | Canola | plastid | 32.38 | 28.44 |
| CDY01429 | Canola | golgi, mitochondrion, plasma membrane, plastid | 31.67 | 28.25 |
| CDX81329 | Canola | plastid | 30.96 | 28.25 |
| CDY34323 | Canola | plastid | 30.96 | 28.16 |
| CDY30600 | Canola | endoplasmic reticulum, golgi | 32.03 | 27.78 |
| CDY17753 | Canola | endoplasmic reticulum, golgi | 32.03 | 27.78 |
| CDY13145 | Canola | plastid | 31.67 | 27.13 |
| CDX89660 | Canola | plastid | 31.67 | 26.89 |
| CDX92660 | Canola | plastid | 28.83 | 25.96 |
Protein Annotations
| EnsemblPlants:CDY31075 | EnsemblPlantsGene:GSBRNA2T00047150001 | GO:A0A078GXA1 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF4 | PFAM:PF04669 | ProteinID:CDY31075 | ProteinID:CDY31075.1 | SEG:seg | TIGRFAMs:TIGR01627 |
| TMHMM:TMhelix | UniParc:UPI0004EE609B | UniProt:A0A078GXA1 | MapMan:21.2.2.2.3 | : | : |
Description
BnaA08g26250DBnaA08g26250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXA1]
Coordinates
chrLK032267:-:144938..145783
Molecular Weight (calculated)
31806.2 Da
IEP (calculated)
7.996
GRAVY (calculated)
-0.339
Length
281 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTRTSQTQE LKLLLICLFA ALVLIFIVRS TLTTSQQHQT PEETTRSKGC AGACNKLPRS LAQALIHYST SVITPQQTPK EIAVSSRVLD KKSPCNFLVF
101: GLGHDSLMWS SLNYGGRTVF LEEDEAWIKQ IKRRFPMLES YHVTYHSKVN QADNLIEVGK GPECTAVGDP RYSMCQLALK GLPAEIYETS WDIIMVDAPT
201: GYYDEAPGRM TAIYTAGMMA RNRERVGETD VFVHDVNREV EDKFSKAFLC EGYMKKQEGR LRHFVIPSYR DGSESNRPFC P
101: GLGHDSLMWS SLNYGGRTVF LEEDEAWIKQ IKRRFPMLES YHVTYHSKVN QADNLIEVGK GPECTAVGDP RYSMCQLALK GLPAEIYETS WDIIMVDAPT
201: GYYDEAPGRM TAIYTAGMMA RNRERVGETD VFVHDVNREV EDKFSKAFLC EGYMKKQEGR LRHFVIPSYR DGSESNRPFC P
001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
Arabidopsis Description
GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.