Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g103360.2.1 | Tomato | plasma membrane | 94.93 | 95.27 |
| CDY31075 | Canola | endoplasmic reticulum, golgi, plasma membrane | 71.74 | 70.46 |
| Bra030789.1-P | Field mustard | endoplasmic reticulum, golgi | 71.38 | 70.11 |
| VIT_12s0035g01340.t01 | Wine grape | golgi | 72.1 | 70.07 |
| AT1G09610.1 | Thale cress | endoplasmic reticulum, golgi | 71.01 | 69.5 |
| CDY20685 | Canola | endoplasmic reticulum, golgi, plasma membrane | 70.65 | 69.39 |
| VIT_12s0035g01170.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 70.65 | 67.24 |
| KRH06044 | Soybean | endoplasmic reticulum, golgi, vacuole | 65.94 | 65.0 |
| KRH50678 | Soybean | cytosol | 15.58 | 60.56 |
| GSMUA_Achr8P29140_001 | Banana | endoplasmic reticulum, golgi | 57.25 | 56.63 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 57.97 | 51.95 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, golgi | 47.1 | 51.59 |
| TraesCS5D01G319700.1 | Wheat | mitochondrion | 51.81 | 47.99 |
| TraesCS5A01G313000.1 | Wheat | mitochondrion | 51.81 | 47.83 |
| HORVU5Hr1G080580.1 | Barley | endoplasmic reticulum, mitochondrion, plastid | 51.81 | 47.67 |
| TraesCS5B01G313900.1 | Wheat | golgi, unclear | 51.81 | 47.67 |
| TraesCS7A01G560100.1 | Wheat | mitochondrion, plastid | 50.72 | 46.36 |
| TraesCS7D01G549800.1 | Wheat | mitochondrion, plastid | 50.36 | 45.42 |
| Os12t0204500-01 | Rice | endoplasmic reticulum, golgi | 48.55 | 45.42 |
| EES16857 | Sorghum | mitochondrion | 49.64 | 45.21 |
| TraesCS7B01G485000.1 | Wheat | mitochondrion, plastid | 49.28 | 45.18 |
| KRH50677 | Soybean | mitochondrion | 15.94 | 40.0 |
| TraesCS4A01G227100.1 | Wheat | mitochondrion | 45.29 | 38.58 |
| PGSC0003DMT400077009 | Potato | extracellular | 38.41 | 38.55 |
| HORVU7Hr1G120340.1 | Barley | plastid | 49.28 | 38.1 |
| TraesCS4B01G089200.1 | Wheat | mitochondrion | 44.57 | 38.08 |
| TraesCS4D01G086700.1 | Wheat | mitochondrion | 44.93 | 38.04 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 38.04 | 37.23 |
| HORVU4Hr1G015310.3 | Barley | endoplasmic reticulum, plastid | 44.57 | 34.75 |
| Os11t0242600-00 | Rice | mitochondrion | 39.13 | 34.18 |
| EES08266 | Sorghum | mitochondrion | 39.13 | 32.93 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 33.33 | 30.46 |
| PGSC0003DMT400039556 | Potato | golgi | 28.99 | 29.74 |
| PGSC0003DMT400064322 | Potato | plastid | 32.61 | 29.22 |
| Zm00001d003239_P001 | Maize | cytosol | 17.39 | 28.74 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 32.61 | 28.66 |
Protein Annotations
| EntrezGene:102584406 | MapMan:21.2.2.2.3 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0032259 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | UniProt:M1CBL2 | PFAM:PF04669 |
| EnsemblPlantsGene:PGSC0003DMG402024882 | PGSC:PGSC0003DMG402024882 | EnsemblPlants:PGSC0003DMT400064018 | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF4 | InterPro:Polysacc_synth_dom |
| TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI000295D298 | RefSeq:XP_006349307.1 | SEG:seg | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402024882]
Coordinates
chr1:+:80078352..80079563
Molecular Weight (calculated)
31383.1 Da
IEP (calculated)
8.860
GRAVY (calculated)
-0.225
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPKTHGSLS LKLLLICVFI AFLLLFVLRS TLTSSSLSTS SSSKSNCSSP KCNKIPSSVA KSLIHYTTSA ITPQQTHKEI LVTSKILDKK SPCNFLVFGL
101: GHDSLMWHTL NYGGRTIFLE EDEAWIQQIK KRFPMLESYH VTYDSKVNQA NVLIEAGKGT ECTTIADPRY SMCQLALKGM PSEIYDIKWD IIMVDAPTGY
201: YEDAPGRMTA IYTAGMMARN REDRETHLFV HDVNRYIEDK FSREFLCEGY MKKQVGRLRH FTIPSHKSNL NMPFCP
101: GHDSLMWHTL NYGGRTIFLE EDEAWIQQIK KRFPMLESYH VTYDSKVNQA NVLIEAGKGT ECTTIADPRY SMCQLALKGM PSEIYDIKWD IIMVDAPTGY
201: YEDAPGRMTA IYTAGMMARN REDRETHLFV HDVNRYIEDK FSREFLCEGY MKKQVGRLRH FTIPSHKSNL NMPFCP
001: MRPKANQNHK LKVLLVFLLA TLILIFIVRS TLTSSQEHQT PQETRSTRCS GACNKLPRSL AQALIHYSTS VITPQQTLKE IAVSSRVLGK KSPCNFLVFG
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
101: LGHDSLMWSS LNYGGRTVFL EEDEAWIKQI KRRFPMLESY HVTYDSKVNQ ADNLIEVGKG PECTAIGDPR YSMCQLALKG LPAEIYETGW DLIMVDAPTG
201: YYDEAPGRMT AIYTAGMMAR NRKQGGETDV FVHDVNREIE DKFSKAFLCE GYMKKQEGRL RHFIIPSYRD GSESESNRPF CP
Arabidopsis Description
GXM1GXM3 [Source:UniProtKB/TrEMBL;Acc:A0A178W7U8]
SUBAcon: [golgi,endoplasmic reticulum]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.