Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g020540.1.1 | Tomato | cytosol | 22.68 | 91.04 |
| Solyc03g110890.1.1 | Tomato | plasma membrane, vacuole | 95.54 | 85.38 |
| Solyc11g020470.1.1 | Tomato | cytosol | 47.58 | 84.77 |
| KRH57238 | Soybean | golgi | 47.96 | 44.18 |
| Bra013845.1-P | Field mustard | cytosol | 29.37 | 44.13 |
| KRH54181 | Soybean | plastid | 46.1 | 40.79 |
| KRH63768 | Soybean | plastid | 44.24 | 40.75 |
| AT4G24910.1 | Thale cress | plastid | 46.47 | 39.68 |
| KRH03967 | Soybean | vacuole | 47.58 | 38.67 |
| GSMUA_Achr9P01440_001 | Banana | golgi | 37.55 | 38.55 |
| CDX92660 | Canola | plastid | 43.87 | 37.82 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, golgi | 36.06 | 37.74 |
| Bra019203.1-P | Field mustard | plastid | 43.49 | 37.5 |
| CDY03407 | Canola | plastid | 42.75 | 36.98 |
| CDY34323 | Canola | plastid | 42.38 | 36.89 |
| Zm00001d001763_P001 | Maize | plasma membrane | 31.23 | 29.89 |
| OQU82596 | Sorghum | plastid | 32.34 | 29.39 |
| TraesCS1D01G370900.1 | Wheat | extracellular, plasma membrane | 29.37 | 29.37 |
| PGSC0003DMT400077009 | Potato | extracellular | 29.74 | 29.09 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 29.74 | 28.99 |
| TraesCS1B01G382900.1 | Wheat | plasma membrane, vacuole | 29.37 | 28.83 |
| TraesCS1A01G365400.1 | Wheat | golgi | 29.37 | 28.62 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 30.48 | 26.62 |
| PGSC0003DMT400084744 | Potato | endoplasmic reticulum | 27.51 | 26.24 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 29.37 | 26.16 |
| PGSC0003DMT400064322 | Potato | plastid | 26.77 | 23.38 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.65 | 21.97 |
| Os11t0488500-01 | Rice | cytosol, nucleus | 11.52 | 9.54 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039556 | EnsemblPlantsGene:PGSC0003DMG400015302 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM | InterPro:Polysacc_synth_dom | PANTHER:PTHR31444 | PANTHER:PTHR31444:SF7 |
| PFAM:PF04669 | PGSC:PGSC0003DMG400015302 | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002959278 | UniProt:M1B8G7 |
| MapMan:35.1 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400015302]
Coordinates
chr3:-:50481219..50482116
Molecular Weight (calculated)
30500.7 Da
IEP (calculated)
9.889
GRAVY (calculated)
-0.161
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFTKRNIIP LLVFILSFAS ILRLVKISVI TSYSSPVFSA LSLVEHSHNI LAEKEINFLY DLVSRKSPCN ILVFGLETQY SSQISTINRG GFTVFLEDNP
101: AKIKLYNSTS NANSTRIHRV EYQTVARDAY KILKHARRNQ KDCYISATAS SSKHDLYSNS SRKCKFMSLV TNVPKEVYEV KWDLVIVDGP DGDKPESPGR
201: MAAIYIAGVL ARRSKNKNGT HVLVHDVDRM IEKWFSWEFL CDTNLVSSKG KFWDFNILAK PNATTFCPA
101: AKIKLYNSTS NANSTRIHRV EYQTVARDAY KILKHARRNQ KDCYISATAS SSKHDLYSNS SRKCKFMSLV TNVPKEVYEV KWDLVIVDGP DGDKPESPGR
201: MAAIYIAGVL ARRSKNKNGT HVLVHDVDRM IEKWFSWEFL CDTNLVSSKG KFWDFNILAK PNATTFCPA
001: MPPQFHQSSL SILNPLLRFS PPSSPDNPKH QRLSTIKMPK FTVRKLIPLL IFVLSSLSVL RLLRISYKSS SKSQSSSSTT FRLSPADSSQ QLRANEGPTA
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
101: LMEKELKLLS DTVTRRSPCN ILVFGFAPQY LMLSSINTRG ITVILEDEPA KIMIPKAEVN PNNTRIYSLK YHQMEVRNAY NLLQHARANP ACAPNMNNQH
201: QGSSDCKLEL RDLPQQVHNT KWDVIVVDGP RGDDLETPGR MGSIYTAAVL ARKGSSNSTT DVFVHDVHRT AEKWLSWEFL CQENLVSAKG TFWKFRIKRQ
301: SNASRFCSPE TVIIR
Arabidopsis Description
Glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [Source:UniProtKB/TrEMBL;Acc:Q9SW35]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.