Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 5
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400077009 | Potato | extracellular | 60.28 | 61.82 |
| VIT_01s0010g03680.t01 | Wine grape | endoplasmic reticulum, golgi | 60.64 | 60.85 |
| KRH31488 | Soybean | endoplasmic reticulum, golgi | 60.28 | 59.86 |
| VIT_14s0068g01970.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 57.45 | 57.45 |
| KRH58773 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 56.38 | 57.4 |
| KRH42675 | Soybean | endoplasmic reticulum | 57.45 | 56.64 |
| Bra034005.1-P | Field mustard | endoplasmic reticulum, golgi | 56.74 | 55.56 |
| CDY12639 | Canola | endoplasmic reticulum, golgi | 56.74 | 55.56 |
| Bra032854.1-P | Field mustard | endoplasmic reticulum | 56.74 | 55.36 |
| CDX84898 | Canola | endoplasmic reticulum | 56.74 | 55.36 |
| CDY27638 | Canola | endoplasmic reticulum | 56.74 | 55.36 |
| AT1G67330.1 | Thale cress | endoplasmic reticulum, golgi | 56.03 | 54.3 |
| CDY28894 | Canola | endoplasmic reticulum, golgi | 56.03 | 54.3 |
| CDY51186 | Canola | endoplasmic reticulum, plasma membrane | 56.74 | 54.24 |
| AT1G27930.1 | Thale cress | endoplasmic reticulum, plasma membrane | 55.32 | 53.98 |
| CDY07428 | Canola | endoplasmic reticulum, golgi | 55.67 | 53.95 |
| Bra004093.1-P | Field mustard | endoplasmic reticulum, golgi | 55.67 | 53.95 |
| Bra030066.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 54.96 | 53.63 |
| KRG97408 | Soybean | plastid | 60.64 | 53.44 |
| GSMUA_Achr3P19550_001 | Banana | mitochondrion | 50.0 | 49.13 |
| GSMUA_Achr9P01430_001 | Banana | extracellular | 48.58 | 47.57 |
| TraesCS2D01G377700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 44.33 | 42.37 |
| HORVU3Hr1G108120.1 | Barley | extracellular, plasma membrane, vacuole | 43.62 | 42.12 |
| TraesCS2A01G381200.1 | Wheat | extracellular | 43.97 | 42.03 |
| TraesCS2B01G398500.1 | Wheat | extracellular | 43.97 | 42.03 |
| TraesCS3D01G492500.1 | Wheat | extracellular | 43.26 | 41.78 |
| TraesCS3B01G545900.1 | Wheat | extracellular | 43.26 | 41.64 |
| Os11t0490100-01 | Rice | plasma membrane | 44.33 | 41.39 |
| Zm00001d007327_P001 | Maize | plasma membrane | 44.33 | 40.72 |
| PGSC0003DMT400064018 | Potato | plasma membrane | 37.23 | 38.04 |
| PGSC0003DMT400080082 | Potato | endoplasmic reticulum, golgi | 40.78 | 37.34 |
| HORVU2Hr1G089430.1 | Barley | endoplasmic reticulum, peroxisome, plastid | 43.62 | 36.18 |
| PGSC0003DMT400065494 | Potato | golgi, plasma membrane, plastid | 33.33 | 31.13 |
| PGSC0003DMT400066571 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 32.98 | 29.62 |
| PGSC0003DMT400064322 | Potato | plastid | 32.27 | 29.55 |
| PGSC0003DMT400039556 | Potato | golgi | 26.24 | 27.51 |
Protein Annotations
| EntrezGene:102593691 | MapMan:35.1 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0045492 | InterPro:IRX15/IRX15L/IGXM |
| UniProt:M1D7Y3 | PFAM:PF04669 | EnsemblPlantsGene:PGSC0003DMG400034315 | PGSC:PGSC0003DMG400034315 | EnsemblPlants:PGSC0003DMT400084744 | PANTHER:PTHR31444 |
| PANTHER:PTHR31444:SF1 | InterPro:Polysacc_synth_dom | TIGRFAMs:TIGR01627 | TMHMM:TMhelix | UniParc:UPI0002961154 | RefSeq:XP_006352193.1 |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400034315]
Coordinates
chr5:-:14071730..14072705
Molecular Weight (calculated)
32175.9 Da
IEP (calculated)
8.292
GRAVY (calculated)
-0.178
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKQNHSHFK PERSWCLVIS LVGLLGGALF ISLFLRTSNN LIGCNNNKLA QEKFLVDNPQ QLLLDAILHY ATSRVIPQQN INEIRISFDV LKNRTPCNFL
101: VFGLGHDSQM WASFNSRGNT LFLEEDPKWV ETILKDAPFV HAETVKYRTM LSEADELVEH FHKEPDCSAK KSFIRGNHGC KLALDMLSDE VYNKEWDLIM
201: IDAPRGYFAE APGRMAAIYS AAVMARNRKG KGVTHVFLHD VERKVEKIYA ELFLCRKYLV KGVGRLWHFE IPAASNVGNS FC
101: VFGLGHDSQM WASFNSRGNT LFLEEDPKWV ETILKDAPFV HAETVKYRTM LSEADELVEH FHKEPDCSAK KSFIRGNHGC KLALDMLSDE VYNKEWDLIM
201: IDAPRGYFAE APGRMAAIYS AAVMARNRKG KGVTHVFLHD VERKVEKIYA ELFLCRKYLV KGVGRLWHFE IPAASNVGNS FC
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.