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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • golgi 3
  • plasma membrane 4
  • endoplasmic reticulum 3
  • vacuole 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:plasma membrane
 plasma membrane: 27341663
msms PMID: 27341663 doi
P Voothuluru, JC Anderson, RE Sharp, SC Peck
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os11t0490100-01 Rice plasma membrane 77.85 79.14
HORVU3Hr1G108120.1 Barley extracellular, plasma membrane, vacuole 73.94 77.74
TraesCS3B01G545900.1 Wheat extracellular 73.94 77.47
TraesCS3D01G492500.1 Wheat extracellular 72.64 76.37
TraesCS2B01G398500.1 Wheat extracellular 70.68 73.56
TraesCS2D01G377700.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 70.36 73.22
TraesCS2A01G381200.1 Wheat extracellular 69.38 72.2
HORVU2Hr1G089430.1 Barley endoplasmic reticulum, peroxisome, plastid 70.36 63.53
GSMUA_Achr3P19550_001 Banana mitochondrion 52.77 56.45
GSMUA_Achr9P01430_001 Banana extracellular 52.77 56.25
CDY28894 Canola endoplasmic reticulum, golgi 48.53 51.2
KRH31488 Soybean endoplasmic reticulum, golgi 47.23 51.06
CDY12639 Canola endoplasmic reticulum, golgi 47.88 51.04
Bra034005.1-P Field mustard endoplasmic reticulum, golgi 47.88 51.04
CDY27638 Canola endoplasmic reticulum 47.88 50.87
CDX84898 Canola endoplasmic reticulum 47.88 50.87
Bra032854.1-P Field mustard endoplasmic reticulum 47.88 50.87
CDY07428 Canola endoplasmic reticulum, golgi 48.21 50.86
Bra004093.1-P Field mustard endoplasmic reticulum, golgi 48.21 50.86
AT1G67330.1 Thale cress endoplasmic reticulum, golgi 47.23 49.83
AT1G27930.1 Thale cress endoplasmic reticulum, plasma membrane 46.91 49.83
CDY51186 Canola endoplasmic reticulum, plasma membrane 47.56 49.49
VIT_14s0068g01970.t01 Wine grape endoplasmic reticulum, plasma membrane 45.28 49.29
KRH58773 Soybean endoplasmic reticulum, plasma membrane, vacuole 44.3 49.1
KRH42675 Soybean endoplasmic reticulum 45.6 48.95
Bra030066.1-P Field mustard endoplasmic reticulum, plasma membrane 45.93 48.79
VIT_01s0010g03680.t01 Wine grape endoplasmic reticulum, golgi 43.65 47.69
KRG97408 Soybean plastid 47.88 45.94
PGSC0003DMT400084744 Potato endoplasmic reticulum 40.72 44.33
PGSC0003DMT400077009 Potato extracellular 39.09 43.64
Solyc07g015920.1.1 Tomato extracellular 38.76 43.27
Zm00001d041782_P001 Maize plasma membrane 41.69 42.95
KRH06938 Soybean endoplasmic reticulum, plasma membrane, vacuole 41.37 42.91
Zm00001d023950_P001 Maize mitochondrion 42.67 42.39
Zm00001d028737_P001 Maize golgi 23.13 42.01
KRG94533 Soybean golgi, mitochondrion 42.02 41.88
Zm00001d001763_P001 Maize plasma membrane 30.62 33.45
Zm00001d007269_P001 Maize mitochondrion, plastid 33.88 31.8
Zm00001d014532_P001 Maize plasma membrane 33.22 31.78
Zm00001d003239_P001 Maize cytosol 17.26 31.74
Zm00001d015307_P001 Maize golgi, mitochondrion, plastid 31.27 29.72
Zm00001d002066_P001 Maize plasma membrane 31.27 28.66
Zm00001d027968_P001 Maize cytosol, mitochondrion, plastid 24.1 23.87
Protein Annotations
EntrezGene:100284801MapMan:35.1UniProt:B6TXL0EMBL:EU969725GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0045492InterPro:IRX15/IRX15L/IGXMProteinID:ONM26562.1
PFAM:PF04669PANTHER:PTHR31444PANTHER:PTHR31444:SF1InterPro:Polysacc_synth_domTIGRFAMs:TIGR01627TMHMM:TMhelix
UniParc:UPI000182DEB4EnsemblPlantsGene:Zm00001d007327EnsemblPlants:Zm00001d007327_P001EnsemblPlants:Zm00001d007327_T001SEG:seg:
Description
Plant-specific domain TIGR01627 family protein
Coordinates
chr2:+:228624430..228625353
Molecular Weight (calculated)
33124.9 Da
IEP (calculated)
8.793
GRAVY (calculated)
0.015
Length
307 amino acids
Sequence
(BLAST)
001: MRPPGRRRVL AAGACALLLA ATFLAAGLLT TSSLAPYLLP PLALSLPCLP AVTAPAGSGY GAAPGVAALA EAAVAYATSE TVPQQSVDEI SLSLAVLRRR
101: APLRLLVFGL GHDSRLWHAL NPGGATVFLE EDPAWYRVVR AQSPFLRAHL VAYRTRLDQA DRLLATYRRH PACLPGGGGG NDTLQLPRVR GNWACPLALY
201: NLPPEVYETE WDMVMIDAPK GYFAAAPGRM AAIWTAAAMA RARQGEGDTD VFLHDVDRRV EKAFAEEFLC ERFRVGGTGR LWHFRIPPVS RRGEDGTATA
301: GDRNPFC
Best Arabidopsis Sequence Match ( AT1G67330.1 )
(BLAST)
001: MIQDKSKGAK QTLLERPWFL AVALAGLIGG AMLITSFIRA TDNTLSLCST AKNTAASIAK YTATPIQLQS IVHYATSHTV PQQSFEEISI SLNVLKERLP
101: CNFLVFGLGR DSLMWASLNP GGTTVFLEED PEWIEAVLKD APSLRAHHVQ YRTHLSEAGR LLSTYKNEPM CLPAKAFPIR YNEKCPLALT SLPDEFYDTE
201: WDLIMVDAPK GYFPEAPGRM AAIFSSAIMA RNRKGDGTTH VFLHDVNRKV ENAFANEFLC EKYKVNSVGR LWHFEIPNAA NMTDQPGDRF C
Arabidopsis Description
At1g67330 [Source:UniProtKB/TrEMBL;Acc:Q9FYG0]
SUBAcon: [golgi,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.